Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00810 ATGGAGAAGATCCAGCACAGTGAAGTGGAAGTGAAGGGACTGAAGCTGCACGTGGCAGAGATTGGAACTGGGTCCAAGGCAGTGCTATTCTTACATGGATTCCCAGAGATCTGGTACACATGGAGGCACCAGATGATTGCTTTGGCAAACGCTGGTTATAGAGCTATTGCCTTTGACTTCAGAGGCTATGGACTCTCTCAGCAACCAGCTGAGCCAGAAAAGGAAACTATGTATGACCTAGTTGATGAAATAGTGGGTCTTTTGGATGCCTTAGACATAACCAAGGCTTTCCTTGTTGGCAAGGATTTTGGGGCAATCCCGGCATATCTTACAGCAGCTTTGCACCCAGAAAGAGTGGGTGCTATCATAACTTTAGGCGTTCCTTTTTTGCTTCCTGGTCCCTCTGCTGTCAAAAACCACCTTCTCCCAAAAGGCTTCTACGTTACTAGGTGGCAGGAGCCTGGGAGAGCAGAAGCAGATTTTGGCCGGTTTCCTGTGAAATCGGTGATAAGGAACATCTACACTCTCTTCTCTAAAAGTGAGGTTCCAGTAGCAGCTGATGATCAAGAAATCATGGACTTGTTCAACCCATCTACTCCTCTACCACCATGGTTCTCTGAGGAAGACCTTGCAACCTATGCATCTTTATATGAAAAATCTGGATTCAGATATGCATTGCAGGTTCCTTACAGGAGTCTCAATGTGGAAACTGGCTCAGGTGAACTAAAGGTTACAAATCCAGCACTTCTCATCATGGGTGAGAAAGATTATGTTTTCAAGTTTCCAGGCATGGAGGACTATATCCGAGGTGGGGCAGTAAAAAATGTTGTGCCGGACTTGGAAATCACATATATTCCGGAAGGAAGTCATTTTGTGCATGAACAAATTCCAGACAAGGTGAACCAGCTCATCATTGAGTTCATTGACAAACAAAGCATCTGA 942 0.4522 MEKIQHSEVEVKGLKLHVAEIGTGSKAVLFLHGFPEIWYTWRHQMIALANAGYRAIAFDFRGYGLSQQPAEPEKETMYDLVDEIVGLLDALDITKAFLVGKDFGAIPAYLTAALHPERVGAIITLGVPFLLPGPSAVKNHLLPKGFYVTRWQEPGRAEADFGRFPVKSVIRNIYTLFSKSEVPVAADDQEIMDLFNPSTPLPPWFSEEDLATYASLYEKSGFRYALQVPYRSLNVETGSGELKVTNPALLIMGEKDYVFKFPGMEDYIRGGAVKNVVPDLEITYIPEGSHFVHEQIPDKVNQLIIEFIDKQSI 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00810 313 PRINTS Alpha/beta hydrolase fold signature 52 67 IPR000073 -
Vian5g00810 313 PRINTS Alpha/beta hydrolase fold signature 112 125 IPR000073 -
Vian5g00810 313 PRINTS Alpha/beta hydrolase fold signature 98 111 IPR000073 -
Vian5g00810 313 PRINTS Epoxide hydrolase signature 52 67 IPR000639 GO:0003824
Vian5g00810 313 PRINTS Epoxide hydrolase signature 112 125 IPR000639 GO:0003824
Vian5g00810 313 PRINTS Epoxide hydrolase signature 246 262 IPR000639 GO:0003824
Vian5g00810 313 PRINTS Epoxide hydrolase signature 285 307 IPR000639 GO:0003824
Vian5g00810 313 PRINTS Epoxide hydrolase signature 32 50 IPR000639 GO:0003824
Vian5g00810 313 PRINTS Epoxide hydrolase signature 98 111 IPR000639 GO:0003824
Vian5g00810 313 PANTHER EPOXIDE HYDROLASE 5 310 - -
Vian5g00810 313 Pfam alpha/beta hydrolase fold 27 261 IPR000073 -
Vian5g00810 313 SUPERFAMILY alpha/beta-Hydrolases 2 310 IPR029058 -
Vian5g00810 313 Gene3D alpha/beta hydrolase 1 312 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00810 Vian-Chr5 28032545 28034048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00810 1 310 Acyl Lipid Metabolism Gene Families AT4G02340 37.267 3.58e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00810 - - gmx:100812544 576.244