Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00788 ATGTCAGCTTTTGTCAAACTCATCGACAAGCGCCATCTCGTGATGGTCGGACTCGAAGGTTTTTACGGTCCTAATGATCCAAAAAGATTGATGGTGAACCCTGAGGACTGGGCATCTCGACTTGGATCTGATTTTATAAGGAACTCCTTGATCTCAAGCATTGATTTCATCTCTGTTCATATCTATCCTGATCATTGGTCTGGAGGTGGATGTCTGGTTTGGCAATTCTTGGTTGGAGGAATGCAGGAGTTTAGTGATGATTTTGGAATCATCCTTAGGGAAAAGACACCAATTCTTTCACCGTTCATTGAACAATCATGCAGATTGACGAAGACTAGTTCTGTAGAATATGGTTCTGTTTTCATCACCAATGGTGTAGTTGGTTAG 387 0.4186 MSAFVKLIDKRHLVMVGLEGFYGPNDPKRLMVNPEDWASRLGSDFIRNSLISSIDFISVHIYPDHWSGGGCLVWQFLVGGMQEFSDDFGIILREKTPILSPFIEQSCRLTKTSSVEYGSVFITNGVVG 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00788 128 PANTHER - 1 66 IPR045053 GO:0004553
Vian5g00788 128 SUPERFAMILY (Trans)glycosidases 1 97 IPR017853 -
Vian5g00788 128 Gene3D Glycosidases 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00788 Vian-Chr5 27634394 27635299 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00788 1 66 Glycoside Hydrolase AT2G20680 71.212 7.60e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00788 K19355 - var:108339358 140.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00788 5 27634394 27635299 Vian5g00788 5 27634394 27635299 ECH