Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00722 ATGGAGCCACGTTCTTTGCACATAGCTATGTATCCATGGCTGGCCATGGGTCACCAAACAGCATTCCTCCATCTATGCAACAAGTTGGCCATAAGGGGTCACAGAATCTCCTTCATCACACCCACAAAAGCACAAGCCAAGTTGGAACCATACAACTTGCATCCTCACTTGATCACATTCGTTACCATCACTGTTCCTCACGTTGAAGGTCTTCCCCCTGATGCACAGACCACTGCAGATGTCACTTACCCTTTGCAACCAAACATCATGACAGCCATGGATCTAACCAAAGATGACATAGAAACCCTTCTCACTGATCTCAAACCTGAACTTGTTTTCTATGACTTCACACATTGGATGCCAACCTTGACCAAGAAATTAGGCATCAAGGCCGTGCACTATTGCACTGCTAGCTCTGTAATGATTGGTTACACTCTTCCACCAGCCAGATATTACCAAGGGATTGACCTATCAGAAAGTAACCTCATGGAACCCCCAGAAGGGTACCCTGACTCTTCCATCAAGCTTCATGCTCATGAGGCTCGTGCCTTTGCCGGGAAAAGAAAGGACACGTTTGGGAGCGATGTTCTCTTCTACGATCGCCAGTTCATAGCACTGAATGAAGCTGATGTGTTGGCATACAGAACATGCAGAGAAATCGAAGGGCCTTATCTTGATTACATTGGAAGCCAGTTCAAGAAGCCTGTGCTGGCAACTGGTCCAGTTATTCTAGAGCCACCAACCTCTGAGTTGGAGGAAAAATTCTCCACATGGCTTGGAGGGTTTGAGGAAGGATCGGTGGTTTATTGTTGTTTTGGGAGTGAGTGCACTTTGAGGTTAGAGCAGTTCCAAGAGCTGGTGCTTGGTCTTGAGCTGACTGGCATGCCATTCTTGGCAGCAGTGAAGGCCCCAGTAGGGTTTGAGACAGTGGAATCAGCAATGCCTGAAGGGTTTGAGGAGAGGGCTAAAGGGAGAGGGTTTGTGTATGGAGGTTGGGTTATGCAACAGTTGATTCTTGCACACCCTTCTGTGGGGTGTTTCATCACACATTGTGGTTCTGGTTCTTTGTCTGAGGCACTGGTGAACAAGTGTCAGTTGGTACTGCTGCCTAATGTTGGTGATCAGATTCTGAATGCAAGGATGATGGCCAACAACTTAGAGGTTGGTGTGGAAGTTGAGAAGGATGAGAATGGAAATTACACAAAGGAGAGTGTGTGCAAAGCTGTGAGCATTGTGATGGATGAGGAGAATGAAACCAGCAAGAAGGTGAGAGATAATCACACTAAGCTCAGAGAGACCCTCCTTGACATAAATTTGGAGTCTTGTTATCTTGACAACCTTTGCAGCAGACTCCAAGAGATAGTTGATGAAGGAGTTTAA 1380 0.4659 MEPRSLHIAMYPWLAMGHQTAFLHLCNKLAIRGHRISFITPTKAQAKLEPYNLHPHLITFVTITVPHVEGLPPDAQTTADVTYPLQPNIMTAMDLTKDDIETLLTDLKPELVFYDFTHWMPTLTKKLGIKAVHYCTASSVMIGYTLPPARYYQGIDLSESNLMEPPEGYPDSSIKLHAHEARAFAGKRKDTFGSDVLFYDRQFIALNEADVLAYRTCREIEGPYLDYIGSQFKKPVLATGPVILEPPTSELEEKFSTWLGGFEEGSVVYCCFGSECTLRLEQFQELVLGLELTGMPFLAAVKAPVGFETVESAMPEGFEERAKGRGFVYGGWVMQQLILAHPSVGCFITHCGSGSLSEALVNKCQLVLLPNVGDQILNARMMANNLEVGVEVEKDENGNYTKESVCKAVSIVMDEENETSKKVRDNHTKLRETLLDINLESCYLDNLCSRLQEIVDEGV 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00722 459 CDD GT1_Gtf-like 6 416 IPR002213 GO:0008194
Vian5g00722 459 ProSitePatterns UDP-glycosyltransferases signature. 332 375 IPR035595 -
Vian5g00722 459 FunFam Glycosyltransferase 2 254 - -
Vian5g00722 459 Gene3D Glycogen Phosphorylase B; 256 435 - -
Vian5g00722 459 Gene3D Glycogen Phosphorylase B; 1 255 - -
Vian5g00722 459 PANTHER GLYCOSYLTRANSFERASE 6 447 - -
Vian5g00722 459 FunFam Glycosyltransferase 255 436 - -
Vian5g00722 459 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 439 - -
Vian5g00722 459 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 283 416 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00722 Vian-Chr5 25987629 25989160 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00722 6 455 Glycosyltransferase AT5G54010 45.898 1.59e-152 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00722 K22794 - gmx:100780270 820.461