Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00643 ATGGCATGGGGATACTTCCCAGAATCAAATAATTCAGAATTTAAGGGGAAAACCTATGAGGGAGGTATAATCACATCAATCCATAAAGTGCCATCAACAGACTCCAAATCTGATTCAAGAGCCATAATTGAAACCCCTTCACTAGGACCAGCATCCTTTGCTGCACTGTTTCCTTGGCAGTCAGGACTAGACTTCAAAGAAAGAATGTTGAATTACCCCAGAACTGCACATTTAATCACAATTATAAGAGACATGGCTAGTGGACGGGTGACTTCAGAAGGAAGGATCAACTACAAGTTGAATGAAATTGACAGAGAAAACATGAGGGCTGGCTTGCAACAAGCACTGAGGATTCTAATAGCTGCAGGAGCAGTTGAGGTAGGCACACACAGAAGTGATGGTCAGAGTCTCAGGTGTAGTGGCGTTAGTGAAAATGAGGTGCAGGAGTTCCTGGACAGTGTGTGTCCAATGGAAGGAGCACTTTCACCAGGTGAGAAATGGAACATATATACTTCTGCTCATCAAATGGGGAGCTGCAGAATGGGGGTCAATGAAAAAGAAGGTGCAGTTGATGAGAATGGAGAGACATGGGAGGCTGAAGGGTTGTTTGTTTGTGATGCTAGTGTGCTTCCAACTGCAGTTGGAGTCAATCCCATGATCACAATCCAATCAACTGCATACTGTATCTCTAGTAGAATAGTAGACTACCTTGGAAAGAGTCAAATCTCAGAAGTTCCTTGA 741 0.4359 MAWGYFPESNNSEFKGKTYEGGIITSIHKVPSTDSKSDSRAIIETPSLGPASFAALFPWQSGLDFKERMLNYPRTAHLITIIRDMASGRVTSEGRINYKLNEIDRENMRAGLQQALRILIAAGAVEVGTHRSDGQSLRCSGVSENEVQEFLDSVCPMEGALSPGEKWNIYTSAHQMGSCRMGVNEKEGAVDENGETWEAEGLFVCDASVLPTAVGVNPMITIQSTAYCISSRIVDYLGKSQISEVP 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00643 246 Pfam GMC oxidoreductase 93 228 IPR007867 GO:0016614
Vian5g00643 246 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 1 240 - -
Vian5g00643 246 Gene3D - 69 236 IPR036188 -
Vian5g00643 246 SUPERFAMILY FAD/NAD(P)-binding domain 117 238 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00643 Vian-Chr5 23113267 23114007 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00643 1 233 Acyl Lipid Metabolism Gene Families AT3G23410 69.787 2.08e-113 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00643 K17756 - gmx:100776182 438.728