Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00631 ATGTCAGAGAAGGACTTAGGTTGGGATTTTCACCTCCGGAAGCTCTCTGTCAGTGGCAGAGACTCTAACACCGCCAACGATCCCGCTTCTGATCCTTCCCTTCTTCCTTCCGTGAAAAAGCTTCATGCTTTATGCAAGACCGAGAATTCCGAGGACTTGGTGGCTAGGGTTTATACCTCCGTTAACAAGATTTTCCAGCGCGCTGCAGCTTCCCTCTCTCAATCTCGAACCTCCAATGGCCTTCTTTTGCTTGCAATTCTTCAGTTTTACCTAGACTTTGGGGAGATTGTTCTTCACGATGCTGATCCTAGTCTTAGGACATTTTTTCGGTCGTGCTTGAGCAGGGAGTTTGCTGATCCTGTTGTTGCAGAAGCAACACTTGAATTTCTCATCAACAACAAGAAGAAGCTTCTAACTTCCTTCCCTAACTTATTACCTCAGTTTTTTCCATTGTTATTAAAGTTGATTGCTTGGAATGGTGAAAGATTAGAGAAACTATTTTTGAATGCCTTCCCAGCCTTGATATCACCTGGGTCATTTCTCCCCTTATTTCCATCTTTAGTAGACTTGCCAATTTTGGTGGTAGCATTGGAAAAGGTGGAAAAAAGCTCTGGACCCTTAATTGGGAGCAGCATAGCTTCTATTCAGAAAAATACTGCCCCTAAGATGCTACTTGCTCTTATGGACGAGGCATATACTGGTTCAACTATAGAAGATGGCGTAGGAGATTCTGAATATGAGGATAATAGTGCAATTGATGTCGCTGATCCATTGTTCCTTGAACTTTTGAAGGATGAAAATGATGGTATCGCTGAACGTCCCTGGTCATCTCCAGTGATGACTGCAATATTACAGACTTCAGTCAATAGTCCTTACTCTGATAAGCTGAAAGCAGTACTTAGCTTGACTCCACGTCTTCTTGATGTGTACTTCTCCATAGCATTGCAAACTGTCAATAATTCTCTGATTTGTGCATTGATTCCCCTGCTCATGTCGAGATATGCTACAATATTTCCGGACAAAATATTTTCATATGAGGTCCGCAAGCGACTTTTGGAGTTTATGCTCTCTACATTTCAGTGTTCACCAAACTTCATTGCCCTTTTAAAGAAACCTATAATGGACAGACTTGGAGAAGCATATGACAGCCCAGTCAAGACAGAATTAGCCTTGCAATTATGTTGGGCCATTGGGGAGCATGGTGGTGGTGGTGGATCTCACAAAGATGAAGCCCGTGAGCTTTTTGAGAGTCTAGAACTGCTTCTGTATGAAAACCTTTCCTCAAGTCGTGTGGGCATGACACAGGAGGTATCCCTTGATAAGGATACTTACAGAAGGTCATCACAGTCCAGGCTTTTATGTTTTGTTGTGACAGCCATAGCAAAGCTTGCTACACATCATCGAGAGTTAATACCAAGAGCACGTGTATCCTTGGGCAAGGTGGCTCGGTCTCGAATTTCTGATGCTAGAGTATGGAGGCGTGCATGCGATTTCCTGGGTTTGATGAAAGACCCTGCTATATGTTCATCCATATTGGGGCCTTCGCGACCTACACAAGGTACAGCGCAGAAAGTTGGCAGCATAAACTGGAGTGAAGGTTCAAAGAAGATGATTGCACATATTCCATTTTACATTCTAGGGGAACAAGAAGGGCCACCTTTTCATGATTTCTCATTTTCAGATATCATTCCCAGAAGATGA 1701 0.4321 MSEKDLGWDFHLRKLSVSGRDSNTANDPASDPSLLPSVKKLHALCKTENSEDLVARVYTSVNKIFQRAAASLSQSRTSNGLLLLAILQFYLDFGEIVLHDADPSLRTFFRSCLSREFADPVVAEATLEFLINNKKKLLTSFPNLLPQFFPLLLKLIAWNGERLEKLFLNAFPALISPGSFLPLFPSLVDLPILVVALEKVEKSSGPLIGSSIASIQKNTAPKMLLALMDEAYTGSTIEDGVGDSEYEDNSAIDVADPLFLELLKDENDGIAERPWSSPVMTAILQTSVNSPYSDKLKAVLSLTPRLLDVYFSIALQTVNNSLICALIPLLMSRYATIFPDKIFSYEVRKRLLEFMLSTFQCSPNFIALLKKPIMDRLGEAYDSPVKTELALQLCWAIGEHGGGGGSHKDEARELFESLELLLYENLSSSRVGMTQEVSLDKDTYRRSSQSRLLCFVVTAIAKLATHHRELIPRARVSLGKVARSRISDARVWRRACDFLGLMKDPAICSSILGPSRPTQGTAQKVGSINWSEGSKKMIAHIPFYILGEQEGPPFHDFSFSDIIPRR 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00631 566 PANTHER AP-5 COMPLEX SUBUNIT ZETA-1 3 565 - -
Vian5g00631 566 Pfam AP-5 complex subunit, vesicle trafficking 30 154 IPR028222 GO:0044599
Vian5g00631 566 SUPERFAMILY ARM repeat 82 434 IPR016024 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00631 K19025 - gmx:100796067 979.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00631 5 22833226 22854886 Vian5g00631 5 22833226 22854886 ECH