Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00596 ATGGAGTCGATCATGGCAAAAGCTTTGGAGTACACTCTCAAGTATTGGCTCAAATCGTTCTCCCGAGACCAGTTCAAGTTGCAGGGTCGCACTGCTCAGCTTTCAAATCTAGAGTTGGATGGGGATGCGTTGCATTCCAGCCTTGGATTTCCACCCATGCTCAGTGTCACCACCGCCAAAGTTGGCAAATTGGAGATCATGGTTTGTCGATTTTCACTTTCACTAATTAGTTTTGCTCTTTTTGATGTTGGTTCCTCAGAATCACAATGCACAAGTAAAACGAGTCTAGAATTAGGCCCTGCTGTTGAAGCTGGTAGTTTTGTGAAGCAAATTTAG 336 0.4435 MESIMAKALEYTLKYWLKSFSRDQFKLQGRTAQLSNLELDGDALHSSLGFPPMLSVTTAKVGKLEIMVCRFSLSLISFALFDVGSSESQCTSKTSLELGPAVEAGSFVKQI 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00596 111 PANTHER UNCHARACTERIZED 1 68 IPR026728 -
Vian5g00596 111 Pfam N-terminal region of Chorein or VPS13 1 68 IPR026854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00596 Vian-Chr5 21632251 21632691 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00596 - - var:108339272 134.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00596 5 21632251 21632691 Vian5g00596 5 21632251 21632691 ECH