Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00573 ATGGCCACCAAATCGTCCACTGAAGCCAAAGATGAAGGCGCCGATACGTCCAACTCGCCTTTCATTTGGGCGGCGGAGAAACCCACCGGAGCTTCATTGGAGAAACTCTGCATCGACGAGATACTGCAGAAGTATTGCGGCGAGTTCGGGCGATGGCAACTGAGGCACTTCGTGCTCACCAGTCTGGCGTGGGCCTTGGAAGCCTTCCACACGATGGTCATGATTTTCGCCGATCGCGAACCAGAGTGGCGGTGCCTCGACGGCGCGGCCGGTTGGGAATGCGACCCGAGCGCCAAAAGCGTGTGCCGGTTCGAACCGGGTTCGTGGGAGTGGATGGGGGACTCGACCGTTGTGGAGTGGGGGTTGTTTTGCGCGGGTAAGTTTAAGGTCGGGCTGGTTCAGGCCGTCTTCTTCGGCGGCTGTATGATCGGCGGTGGAGTGAGATCTAAGATCGCGTCCGGTGGTGGAGTGAGATCTGAGATCGTGTCACGGGTTGGGGTTGCGGGGTGGGATGCAACCATGGCTTTGGGCAGCAAAAACGAAGAGACGACGTTGAAGGAGAGGTGGCGACGACGGAGCAACGGAGTGGTGGCGACGACGGAGCAACGGAGTGGAGGCGACGAAGAAGCGGAGCGGCGGAGTGGTGCTGGAACATTCGGTCACCTTTCAGACTCAGTGCTCGGAAGAAAAGGCTCTCTCACAGTGGTTTGTGCCCTAAACACCATTTTTGGCACCTTGACAGCTTTCTCCCCCAGCTACTCTTTCTACATCTTCTTTCGCTTCCTCACTGGTTGCAGCACCGGTGGCGTTGGTCTCTGCGCCTTCGTCCTCGCCACCGAGCCAGTGGGTCCCAGTTCCCGCGGCACCACCGGCATGTGCACCTTTTACTTCTTCTCCTCCGGCATCGCGATGTTATCTGTCATCGCCTACATCTTTCCAACGTGGCGAAAACTCTATATAGCCTCTTCCATCCCCTCCCTCCTCTTCCTTCTCTTCATCCTCCCCTTCATTTCAGAGTCCCCGAGATGGTACCTCATTAGAGGAAGAAAATCCGAAGCAATGAAAGTCATCACTGCCATGGCTACCACCAACGGTACTCACATCCCAAAAGGGGTTCGTCTAATTCTAGACCATCAATCACCACAATTACCACCACCACCACTGTCATCCTTATCATGCAACAGCATTCAAGAACAGGTATTAGCAGAGGTCAACTCCTTAAGCGAGTCCCAAAATCAAGAGAAATTAGTCTCTGATTCTATCCTTCTGGGCTCACCCAAAGGATCGACATGCCACGCGGCGGTGGCTGGTTCGCTTATCGACGTGATACGCTCGCCAATGACACGTTCGAGGTTGATCCTAGCCGTGGTCATCAATTTCCTATGCTCCGTTGTGTACTACGGCTTGAGCCTCAACGTGGTCAACCTTGAAACCAACCTCTACCTTACTGTGATACTCAACGCCGTGGCGGAGATGCCGGCTTTCATGATAACAGCGATTTTTCTGGACCGGTGGGGGAGGAAGCCGTTGACCATAGCGACGTTATGGTTCAGTGGCCTGTTCTGCTTTGCTGGGAGTTTGGCGAGAAATGTTGGGGTATGGAAGGGTGTGAGAATGATGTGTGGGATTTTGGGAATTTTTGGAATGGCGGGGACCTATAATCTGCTGTTCATATACACGGCGGAGCTGTTTCCGACGGTGGTAAGGAACGCTGCGCTAGGGTGCGCCACGCAGGCGGCGCAGATGGGTGCGATACTGGCGCCGCTGGTCGTCGTTATTGGTGGATCGTTTCCGTTTATGATTTTTGCTCTGTGTGGACTTGGTGGTGGATTTTTCGCGTTTTATCTGCCGGAAACATTGAACCAACCTCTTTATGATACGCTAACGGGAATGGAGGCTACGGAAAACAGCGTTACCTCTTCCATTGTATGA 1932 0.5419 MATKSSTEAKDEGADTSNSPFIWAAEKPTGASLEKLCIDEILQKYCGEFGRWQLRHFVLTSLAWALEAFHTMVMIFADREPEWRCLDGAAGWECDPSAKSVCRFEPGSWEWMGDSTVVEWGLFCAGKFKVGLVQAVFFGGCMIGGGVRSKIASGGGVRSEIVSRVGVAGWDATMALGSKNEETTLKERWRRRSNGVVATTEQRSGGDEEAERRSGAGTFGHLSDSVLGRKGSLTVVCALNTIFGTLTAFSPSYSFYIFFRFLTGCSTGGVGLCAFVLATEPVGPSSRGTTGMCTFYFFSSGIAMLSVIAYIFPTWRKLYIASSIPSLLFLLFILPFISESPRWYLIRGRKSEAMKVITAMATTNGTHIPKGVRLILDHQSPQLPPPPLSSLSCNSIQEQVLAEVNSLSESQNQEKLVSDSILLGSPKGSTCHAAVAGSLIDVIRSPMTRSRLILAVVINFLCSVVYYGLSLNVVNLETNLYLTVILNAVAEMPAFMITAIFLDRWGRKPLTIATLWFSGLFCFAGSLARNVGVWKGVRMMCGILGIFGMAGTYNLLFIYTAELFPTVVRNAALGCATQAAQMGAILAPLVVVIGGSFPFMIFALCGLGGGFFAFYLPETLNQPLYDTLTGMEATENSVTSSIV 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00573 643 MobiDBLite consensus disorder prediction 1 20 - -
Vian5g00573 643 ProSitePatterns Sugar transport proteins signature 1. 498 514 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vian5g00573 643 SUPERFAMILY MFS general substrate transporter 218 624 IPR036259 -
Vian5g00573 643 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 215 627 - -
Vian5g00573 643 ProSiteProfiles Major facilitator superfamily (MFS) profile. 132 621 IPR020846 GO:0022857
Vian5g00573 643 MobiDBLite consensus disorder prediction 194 216 - -
Vian5g00573 643 Pfam Sugar (and other) transporter 217 361 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vian5g00573 643 Pfam Sugar (and other) transporter 463 625 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vian5g00573 643 Gene3D MFS general substrate transporter like domains 214 631 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00573 Vian-Chr5 20530021 20538926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00573 215 637 Organic Solute Cotransporters AT3G20660 61.466 4.91e-166 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00573 K08202 - fve:101296978 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00573 5 20530021 20538926 Vian5g00573 5 20530021 20538926 ECH