Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00567 ATGGGAGCACCAATCTTTAACACTCCCTCCTTCACACTCTTTGTTTTTCTCTCTCTCCAACTTTATCTCTCTTTGTCGTCCTCTCCCTCCATCCATGACCTTCTCCGTTCCAAAGGACTACCCCCTGGTCTCTTGCCAGAAGAGGTAAAGTCCTACACTTTCTCCCAAAATGGCCACTTGGAAGTGTTCCTAGACGCACCTTGCTTGACCAAGTACGAGAACAGAGTCCTCTTTGAGCAAGTCGTCACTGCCAACCTCACCTATGGTAGCCTCATAGGAGTTGAGGGTCTCCAACAAGAAGAACTCTTTGTCTGGCTCCCTGTCAAGGACATAATCGTAAACGACCCTTCTTCAGGGTTGATACTCTTTGACATTGGCCTTGCCCACAAACAACTCTCTCTCTCCCTCTTTGAAGATCCACCTCACTGCAAGCCCGAAGCTGTTCTCACAGCTACATTTTCACAAACTGAATACTTTCCGAGGTGGGTTGAGGAATCATGTGAGGAAGGAAAAAGGTTTGGAGGTCCTGAGGTAGAAAAAGATGCCACCCTGTGTTTCAGGCTTCACTTGTTGTCTTTTTCTATGTCATGTTTATATAATTTTAGCCTTGCAATGCAACTATAG 624 0.4615 MGAPIFNTPSFTLFVFLSLQLYLSLSSSPSIHDLLRSKGLPPGLLPEEVKSYTFSQNGHLEVFLDAPCLTKYENRVLFEQVVTANLTYGSLIGVEGLQQEELFVWLPVKDIIVNDPSSGLILFDIGLAHKQLSLSLFEDPPHCKPEAVLTATFSQTEYFPRWVEESCEEGKRFGGPEVEKDATLCFRLHLLSFSMSCLYNFSLAMQL 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00567 207 SUPERFAMILY At5g01610-like 12 144 IPR036758 -
Vian5g00567 207 Pfam Protein of unknown function, DUF538 32 138 IPR007493 -
Vian5g00567 207 Gene3D - 19 144 IPR036758 -
Vian5g00567 207 PANTHER T31J12.3 PROTEIN-RELATED 21 144 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00567 Vian-Chr5 20380022 20381523 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00567 - - gmx:100790931 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00567 5 20380022 20381523 Vian5g00567 5 20380022 20381523 ECH