Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00440 ATGACACTTTTTGGTAAAATCAGCACTGAAATTGGAGTTCATGCAACTGCTGAAAAGTGGTTCAAGCTCTTGGCAACGCAACTCCATCATGTTCAAAACCTTGCTGACAGAGTTCATGGAACCAAGCTGCACCATGGTGAAGACTGGCATCACAATGAGTCCATCAAGCAATGGACTTATGTCATAGATGGTAAGGTTTCAACATGTCATGAGAGTATTGAATCTGTTGATGAAGCAAACAAAACAATCTCCTTCAAGGTATTCGGGGAAGAGATCGAGCAGAAGTTTAAGGTGTTTAAGGTCATATTTCAAGCGATTGATAAGGAGAATGGTGGTGCTATTGTAAAATGGACCATTGAATATGAGAGGGTTAGTGAGGAAGTTGATCCTCCATACAGCTACATCGAGTTCCAGCATAAATGCACTGCCGACATTGATGTTCATCTTCTGAAGGCATAG 459 0.4139 MTLFGKISTEIGVHATAEKWFKLLATQLHHVQNLADRVHGTKLHHGEDWHHNESIKQWTYVIDGKVSTCHESIESVDEANKTISFKVFGEEIEQKFKVFKVIFQAIDKENGGAIVKWTIEYERVSEEVDPPYSYIEFQHKCTADIDVHLLKA 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00440 152 Gene3D - 1 152 IPR023393 -
Vian5g00440 152 SMART Bet_v_1_2 2 152 IPR000916 GO:0006952
Vian5g00440 152 Pfam Pathogenesis-related protein Bet v 1 family 5 151 IPR000916 GO:0006952
Vian5g00440 152 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN 1 152 - -
Vian5g00440 152 SUPERFAMILY Bet v1-like 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00440 Vian-Chr5 11678395 11679053 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00440 - - pvu:PHAVU_011G182500g 259.225