Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00434 ATGTCCCTTTCTGGTAAAATCAGCATTGAAATTGAGGTTCATGCAACTGCTGCAAAGTGGTTCAACCTCTTCGCAACTCAACTCCATGAAGTTCAAAACCTTACCAACAGAGTGCATGAAACCAAGCTGCATCATGGTCGTGATTGGCATCACAATGAATCCATCAAACAATGGACTTGTACAATAGATGGTAAGGTTACAAAATGTCAGGAGAGTATTGAATCTGTTGATGCAGCTCACAAAAGAATCAGCTACAAGCTGTTTGGTGGAGATATTGGTAATAAGTATAAGGTGTTCAAGCTGATATTTGAAGCCATTGATAAAGAAAGTGGTGCTATTATCAAATGGAGCATTGAATATGAGAGGATTGGAAAGGAAGTTGATCCTCCTTATGGGTACATGGAATACCTGCACACTGGAAGTGGAGAGATTGATGGCCATCTTAAGGCATAG 453 0.4018 MSLSGKISIEIEVHATAAKWFNLFATQLHEVQNLTNRVHETKLHHGRDWHHNESIKQWTCTIDGKVTKCQESIESVDAAHKRISYKLFGGDIGNKYKVFKLIFEAIDKESGAIIKWSIEYERIGKEVDPPYGYMEYLHTGSGEIDGHLKA 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00434 150 Gene3D - 1 149 IPR023393 -
Vian5g00434 150 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN 1 148 - -
Vian5g00434 150 SUPERFAMILY Bet v1-like 1 149 - -
Vian5g00434 150 SMART Bet_v_1_2 2 150 IPR000916 GO:0006952
Vian5g00434 150 Pfam Pathogenesis-related protein Bet v 1 family 2 149 IPR000916 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00434 Vian-Chr5 11520407 11521356 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00434 - - gmx:100500325 248.054