Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02492 ATGGACGAGGGCAAAGCAGCAGCTCAGAAATCTGTTCAGACTTTTGATCCTCAAAAGGCCCCCAAAAGGAACAAGTTTGCTTTCGCTTGTGCCATATTGGCTTCCATGACTTCCATATTACTTGGCTATGACGTTGGGGTGATGAGTGGAGCGGTGATATATATAAAGAGGGACCTGAAACTGACGGACGTGCAAATCGAGATCGTGGTAGGAATCATCAACCTTTACTCTCTGATTGGTTCGTGTCTCGCCGGGAGAACCTCGGACTGGATCGGTCGGCGTTACACGATCGTCGTGGCCGGAGGCATCTTCTTCGCCGGAGCCATCCTGATGGGATTCTCTCCAAACTATCCCTTTTTGATGTTCGCGCGGTTTGTGGCGGGCGTGGGCATCGGTTATGCTCTGATGATTGCTCCGGTCTACACGGCGGAAGTGTCCCCTCCTTCGTGTCGTGGTTTTCTGACCTCCTTCCCCGAGGTATTCGTGAATGGAGGGATATTACTGGGATACATATCAAACTACTGCTTTTCGAAGCTGCCACTTCACCTTGGATGGAGGATGATGCTGGGAGTGGGGGCGGTGCCTTCGGTGATCCTGGCCGTGGGAGTGTTAGCCATGCCGGAGTCACCACGATGGCTGGTCATGAGAGGTAGGCTCGGCGAAGCCACAAAAGTTCTCAACAAAATCTCCGACTCTCCCCAAGAGGCTCAGCTCAGGCTAGCAGATATCAAAGCCGCGGCTGGGATCCCGGAGGACTGCAACGACGACGTCGTTCAAGTGACCAACCAGAATAGCGGCGGTGAGGGTGTATGGAAAGAGCTAATCCTTTACCCTACACCCGCGGTGCGTCACATCCTCATCTCCGCTCTGGGCCTCCACTTCTTCCAACAGGCTTCCGGCATAGACGCCGTGGTGCTGTACAGCCCCGAGATTTTCAAAAAGGCTGGCCTGGAATCCGACGCCGAGCAGCTTCTGGCGACCGTGGCTGTTGGATTCGCCAAGACCGTTTTCATCTTGGTGGCTACGTTTTTGTTGGATCGGGTCGGGCGTCGGCCCTTGTTATTGACCAGCGTTGGCGGCATGGTCTTCTCGCTTCTCACGCTGGGCGTAAGCCTCACCATCATTGATCGCTCACGCGCCGTGATCAAATGGGCCATTGGCCTGAGCATAGGGATGGTCTTGTCCTACGTGTCGACGTTCTCCGTTGGAGCGGGTCCCATCACGTGGGTGTACAGCTCGGAGATCTTCCCGTTGAGGCTACGCGCCCAGGGTGCGGCTATGGGAGTTGTGGTGAATAGGGTGACGAGTGGAGTTATCTCAATGACGTTCTTGTCCCTGTCTGATAAGATCACTATTGGTGGGGCCTTCTTCATCTTCGGGGGAATCGCTATGTGTGGATGGATCTTTTTCTTTACCATGCTCCCCGAAACACAGGGCAAGACCCTTGAGGAAACGGAAGGGTCTTTTGGTAAATTCCTGGCATGGTCCAAAAGCAGTGTTTTGACAACGTGCACGTGGCAGCTTGCCATTGGCTCAGGTGCCACAGACGTTCGTTCAAGCCTTCGTTCTTCTCGTTCGTTCAAGCCTTCTCTGTCGTCCGTCTTCTCTCTCGCTGTGTCGTCCGTCTTCTCGTTCGTTCAAGCCTTCGTTCTCTTGCCGTGTTCGAAGCTTCCATCCTCAGTTTCGTTTTGTCCTCCTTCTTCAAAACGTGCGTTGAAACCCTTACATTTTGGTGTAAGTAAAAATGGGCGAGCCCTGACATTGGCCGTTGCAATGGAAGGGAAAAAAGCAAGTTGGCGACTTCTTATCTCGATGGATTCATCCATCATTATTGAAATGAATCGTTTGCTCCGACAGTGTCATGTGGATCGGATTAGGATGACACCATTTATGTGGTGTGTGAATATTAATAACCCTGTGGAGGTGAATTTAAAATTATTGAAGGTTATGGTTAGCAGGTGGGTTGGAAATGATAACAGTTTTAGAGTTCGTCAAAAGTTGGTGCCGTTTAGAGTTGTTGATGTGTTGATGAGCTTAGGTTTAGAAATAGGTGGTTTAGAGATTCCCTTTGATGAAGTAGTTGGTGGATTGGTTGGTGAATTGTTCAAATCAAAAACCATCAGTTTGAAGGACTTGACAGACATGTTTAATGTCATTGTTGATGATAAAAACATTGAAGTCGATGTAGTGTGTATCCCCCAGTCAGTCACTCTCAGTGGCAATGTGGCAGTGTTGCAGGCTTGGGCGGTTGAGAGACTTTCTTTGCATGGTCATCCTTCGCACCGGTTTTTCCCGCGCATAATGAGATGGTTCCCGTTTAAATCAAGGACCGAAAAAATTGAAAATATTTTTATGACCGGAGATTTAAATATGGAGTGGTATATACGAAATGAAGATCGTCATAGGCCGGAAATCCGTGCAGCTTTCAACATGGATGACGGAGGAATGAGTGAAGGATCCTTGGGTGCGGAGGAGAGATTGAGGAAAAATAACGAACATATCAGAGCATTGAATGCCAAGATTGGAGTTCTGACTAGGGAGCTATTTGAAATTTATCAAACTCCAATCTTTCATGAAAAAGATGCATGTGCCACTGATGAAGAGGTTGGGGGTGGAGGTGAGGAGAATGCTGAAGTTGGGGGAGAAGAAGAAGGTGATGGACATGGAGTTGGAGGTGAGGAGAATGCTGAAGTTGGGGGAGAAGAAGAAGGTGATGGAAATGAAGTTGATGACCCCCTAGGTGCACATGCTGAAGTAAGAGGGGATGATGAAACTGTTGGTAACATTAATTTTATTGAAATAGAAGATGATGGTGATGAAGGAGAACCGGAGGTCGTGCCATTGGCTATACCCCCATTGCGGAGTTTTGTTGGTGATCCAAGCACCAGTGTTGATGTAAACCAATTGTATACAGCAGTCAACATCAGAGAGATGAACGTACACAGGGTTGTAAGCGAGATAATTGGCCAAAGCTTGAGCACGACTTCAATTTACACTTTGGCCCCAATGAAATACGTTGACAACATGGTGGTGTTATTTGCTTGTACGGTCTTTATGTACTTTGAGAAAAGGTTGTGCGGTGTTGTTAAGAGGTTTCATTTTAGTCCGTTATACTCGCACCATATTCTTACAGATTATAGGAAACGTCCACAGAATCACCATGTATTCACGCTTCATAACTATAACACTTATTTGCGTTCCGATCATTTTGGACTTGAAGAATTACCCACGGCGGACTTTGTGAGTAACCTTGAATTTGCAAATCTTGTCGACTTTTGGTCAATGGAGATTTTTGTGATTGATTCATTGGGGAAGGGGATCAGAGACCGCAAAAGGATAGACACAGCCGTTGCTGAAAATATGGCACGGTTTTTTTGCATCCTGATGAATATACCAGAAGGTAGTATTGGTCCTTTGACAGTTAAACAAGCAAATATCCCATCCCAACCAAACTTACATGATTGTGGAGTAATAATGTTGAAAGCAATGGAAATCTGGGATGGAGATGAAAAATACAACGGGAAAAGCATGCCTGAATATACAACTGAGGAGCTGCTTGGGATTAGAAAGAAATATGTGTGTGACTGGATCCTGGACAAGGAGAACATTAGCAGAATGGAAGCCCTACATCTATACGGCATTGTCTAG 3648 0.4745 MDEGKAAAQKSVQTFDPQKAPKRNKFAFACAILASMTSILLGYDVGVMSGAVIYIKRDLKLTDVQIEIVVGIINLYSLIGSCLAGRTSDWIGRRYTIVVAGGIFFAGAILMGFSPNYPFLMFARFVAGVGIGYALMIAPVYTAEVSPPSCRGFLTSFPEVFVNGGILLGYISNYCFSKLPLHLGWRMMLGVGAVPSVILAVGVLAMPESPRWLVMRGRLGEATKVLNKISDSPQEAQLRLADIKAAAGIPEDCNDDVVQVTNQNSGGEGVWKELILYPTPAVRHILISALGLHFFQQASGIDAVVLYSPEIFKKAGLESDAEQLLATVAVGFAKTVFILVATFLLDRVGRRPLLLTSVGGMVFSLLTLGVSLTIIDRSRAVIKWAIGLSIGMVLSYVSTFSVGAGPITWVYSSEIFPLRLRAQGAAMGVVVNRVTSGVISMTFLSLSDKITIGGAFFIFGGIAMCGWIFFFTMLPETQGKTLEETEGSFGKFLAWSKSSVLTTCTWQLAIGSGATDVRSSLRSSRSFKPSLSSVFSLAVSSVFSFVQAFVLLPCSKLPSSVSFCPPSSKRALKPLHFGVSKNGRALTLAVAMEGKKASWRLLISMDSSIIIEMNRLLRQCHVDRIRMTPFMWCVNINNPVEVNLKLLKVMVSRWVGNDNSFRVRQKLVPFRVVDVLMSLGLEIGGLEIPFDEVVGGLVGELFKSKTISLKDLTDMFNVIVDDKNIEVDVVCIPQSVTLSGNVAVLQAWAVERLSLHGHPSHRFFPRIMRWFPFKSRTEKIENIFMTGDLNMEWYIRNEDRHRPEIRAAFNMDDGGMSEGSLGAEERLRKNNEHIRALNAKIGVLTRELFEIYQTPIFHEKDACATDEEVGGGGEENAEVGGEEEGDGHGVGGEENAEVGGEEEGDGNEVDDPLGAHAEVRGDDETVGNINFIEIEDDGDEGEPEVVPLAIPPLRSFVGDPSTSVDVNQLYTAVNIREMNVHRVVSEIIGQSLSTTSIYTLAPMKYVDNMVVLFACTVFMYFEKRLCGVVKRFHFSPLYSHHILTDYRKRPQNHHVFTLHNYNTYLRSDHFGLEELPTADFVSNLEFANLVDFWSMEIFVIDSLGKGIRDRKRIDTAVAENMARFFCILMNIPEGSIGPLTVKQANIPSQPNLHDCGVIMLKAMEIWDGDEKYNGKSMPEYTTEELLGIRKKYVCDWILDKENISRMEALHLYGIV 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02492 1215 Pfam Sugar (and other) transporter 30 486 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vian4g02492 1215 ProSitePatterns Sugar transport proteins signature 2. 126 151 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vian4g02492 1215 Gene3D Adenoviral Proteinase; Chain A 964 1199 - -
Vian4g02492 1215 SUPERFAMILY Cysteine proteinases 981 1193 IPR038765 -
Vian4g02492 1215 PRINTS Sugar transporter signature 121 140 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vian4g02492 1215 PRINTS Sugar transporter signature 413 425 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vian4g02492 1215 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vian4g02492 1215 PRINTS Sugar transporter signature 38 48 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vian4g02492 1215 PRINTS Sugar transporter signature 390 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vian4g02492 1215 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 24 495 IPR045262 GO:0015144
Vian4g02492 1215 MobiDBLite consensus disorder prediction 866 915 - -
Vian4g02492 1215 CDD MFS_PLT 33 484 IPR044776 GO:0005351
Vian4g02492 1215 SUPERFAMILY MFS general substrate transporter 17 485 IPR036259 -
Vian4g02492 1215 Gene3D MFS general substrate transporter like domains 21 491 IPR036259 -
Vian4g02492 1215 FunFam probable polyol transporter 4 20 492 - -
Vian4g02492 1215 ProSiteProfiles Major facilitator superfamily (MFS) profile. 30 478 IPR020846 GO:0022857
Vian4g02492 1215 NCBIfam sugar porter family MFS transporter 6 485 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vian4g02492 1215 ProSitePatterns Sugar transport proteins signature 1. 84 101 IPR005829 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02492 Vian-Chr4 41492167 41498584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02492 17 492 Organic Solute Cotransporters AT3G18830 73.950 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02492 - - gmx:102670364 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02492 4 41492167 41498584 Vian4g02492 4 41492167 41498584 ECH