Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02466 ATGAACAACACAATGGTGGAAGAGAAGGCAGATGTGATCAATGGAAAAGAAGTTATACCCCTTCTCACCCCATTCAAGATGGGAAAATTCAATCTTTCTCACAGGATTGTTCTGGCACCATTAACAAGAACAAGATCTTACAACTTCGTGGCTCAGCCTCATGCTGCTCTCTATTATTCTCAAAGAACAACAAAAGGTGGACTTTTGATTGGAGAAGCCTCAGGGGTGTCAGAAACTGCACAAGGGTACCCAAATACACCAGGCATTTGGACAAGAGAACAAGTGGAAGCATGGAAACCAATTGTGAGAGCTGTTCACGAGAAAGGGGGTATATTCTTTTGCCAACTTTGGCATGCTGGAAGAGTCTCCAACTATGCGTATCAGCCAAATGGACAACCTCCAATTTCAAGCACAAACAAGGCAATTGAAGGTAGCAACACCAAATATCCCTCTCCACATCGTCTCAGAACAGATGAAATACCTATGATTGTCAATGACTTCAGAATGGCAGCCAAAAATGCTATAGAAGCTGGCTTTGATGGTGTGGAGATACATGGAGCCAATGGATACTTACTCGACCAGTTCCTAAAAGACCATGTGAACGACAGAGACGATGAATTTGGAGGTAGTTTAGAAAATCGTTGTCGATTTCCACTGATGGTCGTGGAGGCAATAATTAACGAGGTTGGATCAGACAGAGTTGGTGTTAGACTCTCTCCTTTTGCTAACTACTGTGATTGCAAAGACTCTGATCCTCAAGCACTTGGCATTTACATGGCTCAATCCTTAAGAAAATTGGACATTCTTTACTGTCATGTCATTGAACCCAGGATGGTTACAATGTTTGAGAAGTGTGAGACCAATGTGTCATTGTCCGATATTAGAAAGGCTTTTGGTGGAACCTTTATTGTGGCTGGCGGTTACAATAGGAGTGGTGGAAACAAAGTGGTTTCCGACGGTGGTGCCGATTTGGTGGCTTATGGACGCTTGTTTTTGGCTAATCCAGATCTGCCGAAGAGATTTGAGCTTGATGCTGAATTGAACAAGCCTGATAGAAGCACTTTTTACACCAGTGATCCTGTTGTTGGATATACAGATTATCCTTTTCTTCAACATGATCACTGA 1125 0.4267 MNNTMVEEKADVINGKEVIPLLTPFKMGKFNLSHRIVLAPLTRTRSYNFVAQPHAALYYSQRTTKGGLLIGEASGVSETAQGYPNTPGIWTREQVEAWKPIVRAVHEKGGIFFCQLWHAGRVSNYAYQPNGQPPISSTNKAIEGSNTKYPSPHRLRTDEIPMIVNDFRMAAKNAIEAGFDGVEIHGANGYLLDQFLKDHVNDRDDEFGGSLENRCRFPLMVVEAIINEVGSDRVGVRLSPFANYCDCKDSDPQALGIYMAQSLRKLDILYCHVIEPRMVTMFEKCETNVSLSDIRKAFGGTFIVAGGYNRSGGNKVVSDGGADLVAYGRLFLANPDLPKRFELDAELNKPDRSTFYTSDPVVGYTDYPFLQHDH 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02466 374 Gene3D Aldolase class I 8 373 IPR013785 -
Vian4g02466 374 CDD OYE_like_FMN 20 352 - -
Vian4g02466 374 PANTHER NADH OXIDOREDUCTASE-RELATED 18 370 IPR045247 GO:0010181|GO:0016491
Vian4g02466 374 Pfam NADH:flavin oxidoreductase / NADH oxidase family 21 345 IPR001155 GO:0010181|GO:0016491
Vian4g02466 374 SUPERFAMILY FMN-linked oxidoreductases 20 371 - -
Vian4g02466 374 FunFam 12-oxophytodienoate reductase 3 14 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02466 Vian-Chr4 41290672 41292550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02466 15 371 Acyl Lipid Metabolism Gene Families AT1G76690 65.934 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02466 K05894 - gmx:100790284 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02466 4 41290672 41292550 Vian4g02466 4 41290672 41292550 ECH