Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02464 ATGGGCGAGGTATCTGAAACGATGACGAAGAAGAAGAAGAAGGGACGCCCCTCTCTTTTGGATCTTCAAAAGCGATCTCTCAAGAAGGAACAGCAACAGAATCACCACCACAACCACCGACAAAACAACCCCAATTCCACAAATTCACACTCAAAAAACACCAACGTTGCTACCCACGACGACGACGACGACGAGAGAAAGGAGAAGAAGCACAAGCTCCTCGTCGGGCTCAATTCCCATCTCCACAACCCGACATTATTCCCCAATTCCCAGCCATTCAATTCCGATCCCAAGAGGCGCAAGATTGACCCTCTCCACAACCACCAAACGGATGGGAAGGTTCCGAAAGCGACTGACAGTAAACATGGTTCGCAGGGGGAGTCCGGTCCCACTACACCTTTGCCAGACAAAAAGCTCTTGCTGTTTATCCTTGACAGGCTTCAAAAAAAGGACACACACGGGGTGTTCTCCGAGCCTGTGGATCCTGAAGAGCTTCCTGATTATCATGACATCATTAAGCACCCGATGGATTTTGGAACTGTGAGAAAGAAATTGGATGGGGGACTTTATACCGACTTGGAACAATTTGAGGCCCGAGCCATGCAAGATATCGCAAGGAAGGACTTTGAGAATCTTAGACAAGATAGTGATGATAGTGAACCGCAGCCCAAAGTTGTGCAGAGAGGAAGGCCACCAGGCAAGCCCTCAAGAAAGTCACTAGGTATGCCTCCTGCTGAGCGCGTTGGACCTGAATCTTCTTCTGATGCAACTCTTGCTTCTGGCGGGGATATTGCTAGTGGCTCCAACGGTTATAATCTCAGGAAAGGACCAAGCAAATTTCAGCCTACAGATTCAATTGCTAGGCCCTACAACAACACTTTTAACAGTGGAGGGTATACTGGTTGGTCTGAATGGGAGAATGAATTTCCAGCTTCTGTTGTAAAAGCTGTGTTAAGATATGGAAAGAAGCAGTTTGCAGTTGATGAGACCAGGCGCGATTCTTACAAATTACCAGTGACTTCAGGAAATGAAGGACCGCTGTTGACCACAGTTGAAGATGAAGTCAAACAACTTCTTGCTGTAGGTATACACATGAAGCATAGTTATGCAAGAAGTCTAGCCCATTTCGCTGCAGATCTTGGTCCTGTTGTTTGGAAGATTGCTTCAAGTAAAATCAGCAGTGTTTTGCCTACAGGACATGACTTTGGTCCTGGATGGGTAAGTGAAGATGACGAGCCACAGAAGCAGCACTTCCCAGTTTGTGACGAGGGTAGAACTTCAGACCCTCCCGTAGTAGAGGATTGTAAAAGTAGATTTTCTTCTCCATCTGGATCACTTCCCCTTGCAAATAGATCCTGCTTGCAAAGTGTTGACATGGTTATAAATAATTATCAAAAAGAATTGAATCCGGCAATCAACATTGCTGGTGGATCTGAGTCCATAACTCCTGTGAAGATTCAGCAGGAATCCATGCCGCACCCTGATGGTTTTGGTTCACATGATTGGTTAGGTTCTAATTTTTCACCACAAATGAAGATGGTAAGACTCGCTGACCTAACTGGGTCACCGAGTGCTGGGGTTGCTCCTCAAATGGATCCCATAAGCAGCCGCATTGCGCAGACAAATACTAATCCATCTCTTTTGGGACAGTACGGGAGCAAATCAAGTCAATTAGAATCCGGTAATTTATTGGCCCGGGAATCTGGGTTTGAGCCACGAAGTTGGTCTCAAGGAATTGCTGGAAAATCATCTTGGCAGGGTTTGGAAGTTCCCACTAAACAGAAGTCTTTTGCACTTTCTAATGACTTGAATGGAAGGATTGGAACTACAAATTCACCTAGTAGTTCCAATGTGGAGGCTGGTTCTCAGTTGCAGCCTAATTTGGCATTACAGCTCTGA 1899 0.4602 MGEVSETMTKKKKKGRPSLLDLQKRSLKKEQQQNHHHNHRQNNPNSTNSHSKNTNVATHDDDDDERKEKKHKLLVGLNSHLHNPTLFPNSQPFNSDPKRRKIDPLHNHQTDGKVPKATDSKHGSQGESGPTTPLPDKKLLLFILDRLQKKDTHGVFSEPVDPEELPDYHDIIKHPMDFGTVRKKLDGGLYTDLEQFEARAMQDIARKDFENLRQDSDDSEPQPKVVQRGRPPGKPSRKSLGMPPAERVGPESSSDATLASGGDIASGSNGYNLRKGPSKFQPTDSIARPYNNTFNSGGYTGWSEWENEFPASVVKAVLRYGKKQFAVDETRRDSYKLPVTSGNEGPLLTTVEDEVKQLLAVGIHMKHSYARSLAHFAADLGPVVWKIASSKISSVLPTGHDFGPGWVSEDDEPQKQHFPVCDEGRTSDPPVVEDCKSRFSSPSGSLPLANRSCLQSVDMVINNYQKELNPAINIAGGSESITPVKIQQESMPHPDGFGSHDWLGSNFSPQMKMVRLADLTGSPSAGVAPQMDPISSRIAQTNTNPSLLGQYGSKSSQLESGNLLARESGFEPRSWSQGIAGKSSWQGLEVPTKQKSFALSNDLNGRIGTTNSPSSSNVEAGSQLQPNLALQL 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02464 632 MobiDBLite consensus disorder prediction 602 632 - -
Vian4g02464 632 MobiDBLite consensus disorder prediction 55 75 - -
Vian4g02464 632 SMART bromo_6 129 218 IPR001487 GO:0005515
Vian4g02464 632 MobiDBLite consensus disorder prediction 1 29 - -
Vian4g02464 632 PRINTS Bromodomain signature 181 199 IPR001487 GO:0005515
Vian4g02464 632 PRINTS Bromodomain signature 151 164 IPR001487 GO:0005515
Vian4g02464 632 PRINTS Bromodomain signature 165 181 IPR001487 GO:0005515
Vian4g02464 632 MobiDBLite consensus disorder prediction 38 54 - -
Vian4g02464 632 MobiDBLite consensus disorder prediction 96 120 - -
Vian4g02464 632 ProSiteProfiles Bromodomain profile. 148 196 IPR001487 GO:0005515
Vian4g02464 632 Pfam Bromodomain 143 199 IPR001487 GO:0005515
Vian4g02464 632 Gene3D - 134 212 IPR036427 GO:0005515
Vian4g02464 632 SUPERFAMILY Bromodomain 118 200 IPR036427 GO:0005515
Vian4g02464 632 PANTHER BROMODOMAIN CONTAINING PROTEIN 8 631 - -
Vian4g02464 632 MobiDBLite consensus disorder prediction 253 288 - -
Vian4g02464 632 MobiDBLite consensus disorder prediction 1 136 - -
Vian4g02464 632 MobiDBLite consensus disorder prediction 212 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02464 Vian-Chr4 41275021 41279207 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02464 K22184 - gmx:100811115 991.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02464 4 41275021 41279207 Vian4g02464 4 41275021 41279207 ECH