Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02458 ATGGATCCCTACAAGCACCGGCCATCCAGCGCTTTTAATTCTCCCTTCTGGACTACAAATTCTGGTGCTCCTGTTTGGAACAACAACAACTCTTTAACTGTTGGAACTAGAGGGAAGTATAATCCTGGTCCAATTCTCCTGGAGGATTATCATCTTGTTGAAAAGCTTGCAAACTTTGACAGGGAACGGATCCCAGAGCGTGTTGTCCATGCCAGGGGTGCTAGTGCAAAGGGTTTCTTTGAGGTCACACATGACGTTTCTCACCTGACATGTGCAGATTTCCTTCGAGCTCCTGGAGTTCAGACACCAGTAATTGTCCGTTTTTCAACTGTCATCCATGAGCGTGGTAGCCCTGAAACTTTGAGGGACCCTCGAGGTTTTGCTGTGAAATTTTACACCAGAGAGGGTAACTTTGATCTTGTTGGAAACAACCTTCCCGTCTTCTTTGTACGTGACGGCATGAAGTTTCCAGATATGGTCCATGCTCTTAAACCCAACCCTAAGAACCACATCCAGGAGAATTGGAGGATCCTTGACTTCTTCTCTCACTTCCCGGAAAGCCTTCACATGTTCTCCTTTTTATTTGATGATTTGGGTGTTCCGCAAGATTACAGGCATATGGATGGTTTTGGAGTTAACACATATACCCTGATCAACAAGGCTGGGAAAGCACTGTATGTGAAATTTCACTGGAAGACCACGAGTGGTGTGAAGTGTCTATTGGAGGAAGAGGCCATTAAGGTGGGAGGAGCCAACCATAGCCATGCTACACAAGACCTTCATGATTCGATTGCTGCTGGTAACTATCCTGAGTGGAAACTATTCATTCAGACAATAGATCCTGAGCACGAAGACAAATTTGACTTTGACCCTCTTGATGTAACCAAGACTTGGCCCGAGGACATTATACCCTTGCAGCCTGTTGGTCGCTTGGTCCTGAATAAGAACATAGATAACTTCTTTGCTGAGAATGAGCAACTTGCATTTTGCCCTGCCATAATAGTTCCTGGTGTATATTACTCTGATGATAAGATGCTTCAAACCAGGATATTCTCTTATGCTGATTCACAGAGGCACAGGCTTGGACCAAACTATCTGCAACTTCCTGCCAATGCTCCCAAGTGTGCTCACCACAACAATCACCATGAAGGTTTCATGAATTTCATCCACAGGGATGAGGAGGTCAATTACTTCCCCTCAAGGTATGATCCTGTTCGTCATGCAGAAAGGTTCCCCATACCTCCTGCTATCTGCTCTGGAAGGCGTGAAAAGAATGCAATTGAGAAGGAGAACAACTTCAAGCAGGCTGGAGAGAGATTCCGATCTTGGGCACCTGACAGGCAAGATAGATTTATCCGCCGATGGGTTGATGCTTTATCTGACCCACGTGTCACTCATGAAATCCGCAGTGTCTGGATATCATACTGGTCTCAGGCTGACCGTTCTCTTGGCCAAAAGATAGCATCTCATCTGAACATGAGGCCAAATATTTAA 1494 0.4552 MDPYKHRPSSAFNSPFWTTNSGAPVWNNNNSLTVGTRGKYNPGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNLPVFFVRDGMKFPDMVHALKPNPKNHIQENWRILDFFSHFPESLHMFSFLFDDLGVPQDYRHMDGFGVNTYTLINKAGKALYVKFHWKTTSGVKCLLEEEAIKVGGANHSHATQDLHDSIAAGNYPEWKLFIQTIDPEHEDKFDFDPLDVTKTWPEDIIPLQPVGRLVLNKNIDNFFAENEQLAFCPAIIVPGVYYSDDKMLQTRIFSYADSQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFIHRDEEVNYFPSRYDPVRHAERFPIPPAICSGRREKNAIEKENNFKQAGERFRSWAPDRQDRFIRRWVDALSDPRVTHEIRSVWISYWSQADRSLGQKIASHLNMRPNI 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02458 497 Gene3D Catalase core domain 8 496 - -
Vian4g02458 497 ProSiteProfiles catalase family profile. 14 497 IPR018028 GO:0004096|GO:0006979|GO:0020037
Vian4g02458 497 CDD catalase_clade_1 16 489 - -
Vian4g02458 497 FunFam Catalase 14 497 - -
Vian4g02458 497 PRINTS Catalase signature 99 117 IPR018028 GO:0004096|GO:0006979|GO:0020037
Vian4g02458 497 PRINTS Catalase signature 139 157 IPR018028 GO:0004096|GO:0006979|GO:0020037
Vian4g02458 497 PRINTS Catalase signature 336 362 IPR018028 GO:0004096|GO:0006979|GO:0020037
Vian4g02458 497 PRINTS Catalase signature 36 59 IPR018028 GO:0004096|GO:0006979|GO:0020037
Vian4g02458 497 PRINTS Catalase signature 304 331 IPR018028 GO:0004096|GO:0006979|GO:0020037
Vian4g02458 497 PRINTS Catalase signature 120 137 IPR018028 GO:0004096|GO:0006979|GO:0020037
Vian4g02458 497 SUPERFAMILY Heme-dependent catalase-like 13 494 IPR020835 GO:0020037
Vian4g02458 497 ProSitePatterns Catalase proximal active site signature. 59 75 IPR024708 GO:0004096
Vian4g02458 497 PANTHER CATALASE 6 493 IPR018028 GO:0004096|GO:0006979|GO:0020037
Vian4g02458 497 Pfam Catalase-related immune-responsive 427 491 IPR010582 -
Vian4g02458 497 Pfam Catalase 18 403 IPR011614 GO:0004096|GO:0020037
Vian4g02458 497 PIRSF Catalase_clade1-3 7 496 IPR024711 GO:0004096|GO:0006979|GO:0020037
Vian4g02458 497 SMART Catalase_2 18 406 IPR011614 GO:0004096|GO:0020037
Vian4g02458 497 ProSitePatterns Catalase proximal heme-ligand signature. 349 357 IPR002226 GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02458 Vian-Chr4 41186674 41190529 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02458 K03781 - gmx:547511 1012.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02458 4 41186674 41190529 Vian4g02458 4 41186674 41190529 ECH