Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02455 ATGGCTCTTTCAGTTTTTCTTCTGCTCTCAATTAGCATCTGCTACCTCGTTTTTTTACAAGATCTTCTTCTCTCTGTGAACGCCTCTAACGCTCAATCTCACAATCTCACTCAAAATTCAGTCACGCCAATCAACTACGATCTCTACCGTTCCAGTCGCAATTTGATGGGGGAGATCAGGGCTTTGGTCCGCCGTCACCCGGATAAGCTCACTATGGAGACCCTTAAAGCTGCAAACAAAGGCTATGGTGCTCAGATTACCGTGGTTACTTATGGCAAAGAAAAGGAAGAGAAAGATAAGAGGTCAAAGCTTCGGATTTTACTTAGTTTTGGGCAGCATGGAAGGGAGCTGATTACCACAGAACTTGCTTTAAGGATTTTGTCAATCTTAAGTGAAGAAAAACTTCTACCCGGCATGGACCAAGCTTCCTTAAACAGCGTACTTGACAAGCTTGTCATAAAGGTGGTTCCAATGGAAAACCCGAATGGCCGCAAAGTCGTTGAAGGTGGAGATCTCTGTGAGAGAAGAAATGGAAGGGGAGTGGATCTCAATCGAAATTGGAGTGTAGATTGGGGCAAAAAGGAGAAGGATTATGATCCATATGAGGAGAATCCTGGAGTTGCTCCATTCAGCGAGCCTGAAAGTCAAATTATGCGGAAACTTGCTATATCTTTTGAACCACATCTATGGGTAAATGTGCACTCCGGAATGGAGGCTCTTTTTATGCCATACGATCATAAAAACACAACACTAGATGGGTTGCCATTGAAACGGATGAAATCGTTTCTTGAAGAAGTAAACCATCATCATTGCCAAGAGCGCTGCATGATTGGGTCTGGAGGCGGTTTAGTCGGGTATTTTGCACACGGGACAGCAACTGATTTCATGTATGACGTTGTAGGGGTACCCATGGCTTTCACCTTTGAGATATATGGAGATGGAACAGCTTCATCAAAAGACTGTTTCAAAATGTTCAATCCCACCGACCCTGCTGCCTACAATAGAGTTCTCAGTGACTGGTCTGCGACATTCTTTACAATTTTCAAATTGGTGCCGCTCCAGATTGGTGAAAAAGCGCCTATTTTGAAACTGGAAAAGTTGGTATCTATAGATGAATATCTAGACGGGTATTTGATGGAGAGAAGAAATAGATATGGAAAGAAGATGGAGGTGCTTGAGCTTGGAATGCAAGAAATAAGAACATATTTTAGGTTATTTTTATTATCTTCAGTGTTATTGTTGTTCATGTTCTGCTCTAGAATTTCAAAAAGCAAGTGTAGTAGACCATTGGTTTCTTCTATTCCCCTCTAA 1311 0.4211 MALSVFLLLSISICYLVFLQDLLLSVNASNAQSHNLTQNSVTPINYDLYRSSRNLMGEIRALVRRHPDKLTMETLKAANKGYGAQITVVTYGKEKEEKDKRSKLRILLSFGQHGRELITTELALRILSILSEEKLLPGMDQASLNSVLDKLVIKVVPMENPNGRKVVEGGDLCERRNGRGVDLNRNWSVDWGKKEKDYDPYEENPGVAPFSEPESQIMRKLAISFEPHLWVNVHSGMEALFMPYDHKNTTLDGLPLKRMKSFLEEVNHHHCQERCMIGSGGGLVGYFAHGTATDFMYDVVGVPMAFTFEIYGDGTASSKDCFKMFNPTDPAAYNRVLSDWSATFFTIFKLVPLQIGEKAPILKLEKLVSIDEYLDGYLMERRNRYGKKMEVLELGMQEIRTYFRLFLLSSVLLLFMFCSRISKSKCSRPLVSSIPL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02455 436 FunFam Carboxypeptidase A6 45 340 - -
Vian4g02455 436 SUPERFAMILY Zn-dependent exopeptidases 45 351 - -
Vian4g02455 436 PANTHER PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B 18 347 - -
Vian4g02455 436 CDD M14-CPA-like 103 325 IPR034269 -
Vian4g02455 436 Pfam Zinc carboxypeptidase 59 328 IPR000834 GO:0004181|GO:0006508|GO:0008270
Vian4g02455 436 Gene3D Zn peptidases 44 330 - -
Vian4g02455 436 SMART zn_carb 49 320 IPR000834 GO:0004181|GO:0006508|GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02455 - - gmx:100813842 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02455 4 41163157 41168105 Vian4g02455 4 41163157 41168105 ECH