Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02441 ATGGAGGAAGTGGTGGAAATAAAGGTAAGCATCTCAACTCCAGCAGTTGAAGTTTCGAAAACTCCGAAAAGCCCTTTTGCATCTCGTTTCATGAGCACCCCTTTGGCCAGTCCCATGAAGAAAGCCATTGAAAACATGCAAGATTACTTCGGAGAAGTTGGTCGCTTCACCAAGCTCGATCCACAAGATGATTGGCTTCCCATCACCCAATCCAGAAACGGAAACGCATATTACGCTGCGTTTCATGTCCTTTCTTCAGGCATCGGATTTCAGGCCCTTCTTCTTCCCTTCGCCTTCACCACTCTTGGCTGGACTTGGGGAATCACGTGTCTCTGTGTGGCTTTTACATGGCAACTCTACACGCTGTGGCTACTGGTTCAACTTCACGAATCGGAATCAGGGGTGCGCCATAGTAGGTACCTCCGACTTGCTATGGCAGCATTCGGAGTAAAGATGGGAAAAGTATTGGCACTGTTCCCAATAATGTACTTATCTGGTGGGACGTGTGTGACACTGATAATGATCGGTGCAAGCACAATGAAGATATTCTTTCAGATGGTGTTTGGAGAGCCATGCCCCCTCTCACCAATTGAGTGGTATTTGGTGTTTACATGCACAGCCATTTTGCTTGCACAGTTACCAAACCTCAATTCAATTGCAGGGGTTTCCCTCATTGGAGCCGTCACTGCCGTAGGTTACTGTGCTCTTATATTTATATTATCTGTGGTCAAAGGTAGACTTGCTCATGTATCGTATGAGCCACCAAGGGGACAATCAGACACTACCATGGTTTTTAGGGCGTGGAATGCACTTGGGATCATTGCCTTTGCTTTCCGCGGTCACAATCTTGTGCTGGAAATACAGGGAACCATGCCTTCCGACGCTAAGCAACCTTCACGCTTGGCTATGTGGAGAGGTGTTATGTTTGCTTACCTGGTGATCGCTTTGTGTTTGTTCCCCCTTGCCATTGGAGGTTATTGGGCCTATGGAAATTTAATACCTACTAATGGAGGGATGTTATGTGCTTTACACAAATACCACGAACATGATACGTCAAAATTCATCATCGCTTTGACAAGCTTGTTAGTTGTTATAAACAGCCTCACTTCCTTCCAAATCTATGCAATGCCGGTATTTGACAATCTGGAATTTAAATACACCAGAAAGAAGAACAGGCCTTGCCCGCGATGGCTACGGATAGCATTCAGGGGGCTCTTTGGGTGCCTAGCATTTTTTATTGCTGTAACTTTACCATTCTTACCTAGTTTGGCTGGTCTGATTGGAGGGGTTGCTCTACCAATAACCTTAGCTTATCCCTGTTTGATGTGGCTACAGATTAAGAAACCACAGAAACGTAGCATAAACTGGAGCCATTTGGGGCATAGTAGAACAGGGCATAGAGATCCATTTCTTCAGTCCACAGTAGAGACAGGATATCGTATTATTGTCAATCACAACATTGGAAGTTTAATAGCAAGCATTTGCAAGGGTTTCCTGGACAAGCATGCAGACCGCACAGAGTCGGGGACGATGTTCCCATCAATGATGAAATCGAAAGAATGCTTGACTTGTGGCTACAGGAGTCATGACGCTTCTATTCTAATTGTGCGATATCGTCAATAA 1623 0.4529 MEEVVEIKVSISTPAVEVSKTPKSPFASRFMSTPLASPMKKAIENMQDYFGEVGRFTKLDPQDDWLPITQSRNGNAYYAAFHVLSSGIGFQALLLPFAFTTLGWTWGITCLCVAFTWQLYTLWLLVQLHESESGVRHSRYLRLAMAAFGVKMGKVLALFPIMYLSGGTCVTLIMIGASTMKIFFQMVFGEPCPLSPIEWYLVFTCTAILLAQLPNLNSIAGVSLIGAVTAVGYCALIFILSVVKGRLAHVSYEPPRGQSDTTMVFRAWNALGIIAFAFRGHNLVLEIQGTMPSDAKQPSRLAMWRGVMFAYLVIALCLFPLAIGGYWAYGNLIPTNGGMLCALHKYHEHDTSKFIIALTSLLVVINSLTSFQIYAMPVFDNLEFKYTRKKNRPCPRWLRIAFRGLFGCLAFFIAVTLPFLPSLAGLIGGVALPITLAYPCLMWLQIKKPQKRSINWSHLGHSRTGHRDPFLQSTVETGYRIIVNHNIGSLIASICKGFLDKHADRTESGTMFPSMMKSKECLTCGYRSHDASILIVRYRQ 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02441 540 PANTHER OS05G0424000 PROTEIN-RELATED 76 456 - -
Vian4g02441 540 Pfam Transmembrane amino acid transporter protein 73 457 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02441 Vian-Chr4 41047215 41052010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02441 12 456 Organic Solute Cotransporters AT1G47670 58.259 1.80e-179 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02441 K26385 - gmx:100788860 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02441 4 41047215 41052010 Vian4g02441 4 41047215 41052010 ECH