Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02428 ATGGAGAAATTATATGGCCTGAGTCATCTCTTCATGACAGTGTTTCTTCACAACTTCGCCATATTCATGGTGGTGCCAGCCATTACTGATGTAACAATGGCTGCTCTTTGTCCTGGACAAGATGAATGCTCACTTGCCATCTACCTCACTGGTTTTCAACAAGCGATGATTGGAGTGGGCACGCTCGTGATGATGCCATTGTTAGGTAATATGTCCGATAAGTATGGGAGGAAGGCCATGCTCACAGTTCCTATGATCCTCACGATCATTCCCACAGGCATATTAGCTTACAACAGGACCAAAAAATTCTTCTATGTGTACTATGTGTTCAAAATACTCATTTCAATGGTTTGCGAAGGAAGCGTCCCTTGCCTCGCTCTAGCTTATGTGGCAGATAACATTCCAGAAAGTGGAAGAAGCACTGCATTCGGCATTATTTCAGGGATAGGATCTGCCGCGTTCGTGTGTGCCACTTTATCAGCTCGATTCTTATCCACTGCCCAAACTTTTCAGGTTTCTACTCTTATTGCTGTGATTGGAGCAGTGTACATGCAATTTTTTCTTCAAGATTCAGTCATTGATGACAAACACCTTTACACCCCAATCATTTCACAACAAAACCCCACAGTTTCTAAGGTCGATGCAAAATTGGAAAGTAACAAGCATCTTCTTAAAGCATTGCGTTCTTTCAAGGACCTAACCTCCTTCCTCGGTAGCAGCTTCACTATTACACAAGCAGCAATTGTTGCATTCTTTAGTAACCTTGCTGATGTTGGCCTTCATGGATCAATGCTGTATTTCTTAAAGGCTCAATTTCATTTTGATAAGAATCAATTTGCTGACTTGATGGTCATTTCTGGAATTTCAGGGACTGTGTCACAGATGTTCCTTTACAGCATAGCATGGTCCTCCTTGATACGAAGTATTGTGTCTAAACAAGTTGGTCCCCATGAGCAGGGAAAGGCTCAAGGTTGCATCTCTGGCATATGTTCAGTTGCACATATAGTTTCTCCCTTAGTTTTCTCTCCATTAACAGCTCTCTTCCTTTCTGAAAAGGCACCTTTCGATTTTCCCGGATTTAGTATAATGTGCATTGGGTTTGCTTCGATGGTATCTTTTGTTCAAAGTATGATGCTTCGAGTGGTTCCTCCCATTTTGAATTAG 1164 0.4201 MEKLYGLSHLFMTVFLHNFAIFMVVPAITDVTMAALCPGQDECSLAIYLTGFQQAMIGVGTLVMMPLLGNMSDKYGRKAMLTVPMILTIIPTGILAYNRTKKFFYVYYVFKILISMVCEGSVPCLALAYVADNIPESGRSTAFGIISGIGSAAFVCATLSARFLSTAQTFQVSTLIAVIGAVYMQFFLQDSVIDDKHLYTPIISQQNPTVSKVDAKLESNKHLLKALRSFKDLTSFLGSSFTITQAAIVAFFSNLADVGLHGSMLYFLKAQFHFDKNQFADLMVISGISGTVSQMFLYSIAWSSLIRSIVSKQVGPHEQGKAQGCISGICSVAHIVSPLVFSPLTALFLSEKAPFDFPGFSIMCIGFASMVSFVQSMMLRVVPPILN 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02428 387 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 303 371 - -
Vian4g02428 387 Pfam Major Facilitator Superfamily 10 383 IPR011701 GO:0022857|GO:0055085
Vian4g02428 387 SUPERFAMILY MFS general substrate transporter 10 372 IPR036259 -
Vian4g02428 387 Gene3D MFS general substrate transporter like domains 7 385 IPR036259 -
Vian4g02428 387 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 192 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02428 Vian-Chr4 40920500 40930548 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02428 2 387 Organic Solute Cotransporters AT2G16990 41.704 8.64e-98 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02428 - - gmx:100799551 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02428 4 40920500 40930548 Vian4g02428 4 40920500 40930548 ECH