Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02426 ATGGACTCTTTCTCTCTCCTCTGCACCGGAGCGCTCCTCGCCGGCGGCCTATACTGGTTCGTGTGCGTACTGGGCCCCGCCGAGCAGAAGGGAAAGCGCGCCACGGATCTGTCTGGCGGCTCCATTTCCGCGGAGAAAGTCCAGGACAACTACAAGCAGTACTGGTCGTTCTTCCGCCGCCCAAAGGAGATCGAAACGGCCGAGAAAGTCCCGGACTTCGTGGACACCTTCTACAATTTAGTGACCGACATCTATGAGTGGGGGTGGGGCCAGTCCTTCCACTTCTCCCCCTCGATCCCCGGCAAGTCCCACCATGAAGCCACGCGCCTCCACGAGGAGATGGCAGTGGATCTCATCCAGGCCGGCCCAGGAGACAGAGTCCTGGACGTGGGCTGCGGCGTGGGTGGGCCAATGCGCGCCATCGCGGCCCACTCCCGCGCTAACGTTGTGGGAATCACAATCAACGACTACCAGGTGAATCGCGCCCGCCTCCACAACAAGAAAGCCAGTCTGGACTCCCTCTGCGAGGTCGTCTGCGGCAATTTCCTCAACATGCCCTTCCCCGACAACTCCTTCGACGGCGCATATTCCATCGAGGCCACGTGTCACGCTCCCAAACTCGAACAGGTCTACGCTGAAATCTTCCGCGTGTTGAAACCCGGTGCGCTCTACGTATCGTATGAGTGGGTCACCACAGACAAGTACCACGCCGACGACCCAGAACACGTGGAGATCATCCAGGGCATTGAGAGGGGTGACGCCTTGCCTGGCCTCAGAAGCCACACTGACATAGCCGAAACCGCGCGTAAGGTAGGGTTTGTCGTGGTTAAGGAACAGGATCTGGCTAAACCCCCTGCTCAACCCTGGTGGAGCCGCCTCAAGATGGGCCGGATCGCCTACTGGCGGAACCACATCGTGGTCACCGTTCTTGCTGCCTTGGGAATTGCACCCAAGGGGACCGTCGACGTCCACGAGATGCTTTTCAAGACAGCTGATTATTTGACAAGAGGGGGCGACTCTGGGATTTTCTCCCCGATGCACATGATCCTCTGCAGAAAGCCCAACGACAGTGACGACCACGTCCAAACCTGA 1092 0.5916 MDSFSLLCTGALLAGGLYWFVCVLGPAEQKGKRATDLSGGSISAEKVQDNYKQYWSFFRRPKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHHEATRLHEEMAVDLIQAGPGDRVLDVGCGVGGPMRAIAAHSRANVVGITINDYQVNRARLHNKKASLDSLCEVVCGNFLNMPFPDNSFDGAYSIEATCHAPKLEQVYAEIFRVLKPGALYVSYEWVTTDKYHADDPEHVEIIQGIERGDALPGLRSHTDIAETARKVGFVVVKEQDLAKPPAQPWWSRLKMGRIAYWRNHIVVTVLAALGIAPKGTVDVHEMLFKTADYLTRGGDSGIFSPMHMILCRKPNDSDDHVQT 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02426 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 355 IPR029063 -
Vian4g02426 363 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 77 354 IPR030384 GO:0008168
Vian4g02426 363 Pfam Methyltransferase domain 128 224 IPR013216 GO:0008168
Vian4g02426 363 PANTHER - 1 357 - -
Vian4g02426 363 FunFam Methyltransferase 44 305 - -
Vian4g02426 363 CDD AdoMet_MTases 126 230 - -
Vian4g02426 363 Pfam Sterol methyltransferase C-terminal 291 354 IPR013705 GO:0006694|GO:0008168
Vian4g02426 363 Gene3D Vaccinia Virus protein VP39 44 309 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02426 Vian-Chr4 40904639 40905730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02426 116 222 Acyl Lipid Metabolism Gene Families AT1G73600 31.776 1.29e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02426 K08242 - gmx:100804517 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02426 4 40904639 40905730 Vian4g02426 4 40904639 40905730 ECH