Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02390 ATGAAGGGAAGCAAGAGGCCGATCCACGCCGTGAAGACATGGTTTCGGCGCCAACCGCCCAAGATGAAGGTCTTTCTTGCGGTGCTAATCGGTCTGGCCGCCTTGCTCTTCCTCAGAATCGTTGTTCATGACCACGATAGCCTTTTCGTTGCCGCCGAGTTTGTCCATGCATTAGGAATCTCCGTCCTCATTTACAAACTCACCAAGGAAAGAACCTGTGCCGGGCTTTCGCTGAAATCGCAGGAGCTGACGGCAATATTCCTAGGCGTAAGACTTTACTGCAGTTTTGTGATGGAATATGATATACACACCTTACTCGATATGGCAACATTGGGAACGACCATCTGGGTTATCTATATGATACGCTTCAAACTCAAATCTAGTTATATGGATGATAAGGATAACCTTGCAACATACTATGTGGTGATACCTTGTGCTGTGCTGTCCTTGTTTATTCATCCGACAACCCGACATCATACAGTTAATAGGATTCTCTGGGCATTTTGTGTTTATCTTGAAGCTGTTTCTGTTCTCCCTCAGCTGCGGGTCATGCAGAACGCAAAGGTAATAGATACTCGTGGACGTCTACTAACTGCATTGGGTTACGGATTGTGGCCTTCATTTGTTCTTCTATCAGAAATTGTTCAAACCTTCATCCTGGCAGATTTTTGCTACTACTACGTCAAGAGTCTTGTCGGAGGACAACTTATTGTTCGACTTCCTGCAGGAGTGGTGTAA 738 0.4566 MKGSKRPIHAVKTWFRRQPPKMKVFLAVLIGLAALLFLRIVVHDHDSLFVAAEFVHALGISVLIYKLTKERTCAGLSLKSQELTAIFLGVRLYCSFVMEYDIHTLLDMATLGTTIWVIYMIRFKLKSSYMDDKDNLATYYVVIPCAVLSLFIHPTTRHHTVNRILWAFCVYLEAVSVLPQLRVMQNAKVIDTRGRLLTALGYGLWPSFVLLSEIVQTFILADFCYYYVKSLVGGQLIVRLPAGVV 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02390 245 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 207 242 IPR000133 GO:0006621|GO:0016020|GO:0046923
Vian4g02390 245 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016020|GO:0046923
Vian4g02390 245 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016020|GO:0046923
Vian4g02390 245 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016020|GO:0046923
Vian4g02390 245 Pfam ER lumen protein retaining receptor 72 192 IPR000133 GO:0006621|GO:0016020|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02390 Vian-Chr4 40600332 40603025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02390 5 245 Miscellaneous Gene Families AT2G21190 68.657 3.38e-138 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02390 - K10949 gmx:100787747 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02390 4 40600332 40603025 Vian4g02390 4 40600332 40603025 ECH