Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02381 ATGGAAGCCCAACCGCAACAATCACCCTGCAAGTCTAGGTTCAGACGCATCTGTGTTTACTGCGGTAGCAGCCCTGGCAAAAGCCCCAGCTACCAGCTCGCTGCTGTTCAACTCGGAAAACAACTGGTGGAGAGGAAGATTGACTTGGTGTATGGAGGAGGAAGCATAGGCTTGATGGGTCTAATCTCACAAGTTGTATACGATGGTGGACGCCACGTGTTAGGGGTCATTCCAAACACGCTTAATGCAAGAGAGATCACCGGCGAGAGTGTTGGAGAAGTCAGAGCTGTATCGGGCATGCACCAACGCAAAGCAGAGATGGCCCGACAGGCCGATGCATTCATTGCACTGCCAGGTGGATATGGCACCCTTGAAGAACTACTGGAAATCATCACCTGGGCTCAGTTAGGTATCCACGATAAACCGGTGGGGTTGTTGAACGTGGATGGGTACTACAACTCGCTGCTGGCATTCATGGACAAAGCTGTGGACGAAGGTTTCGTAACACCTGCTGCCCGTCACATTATTGTTTCTGCCCAAACTGCCCAAGACCTCATGTGCAAACTTGAGGAATATGTCCCCGAGCACTGTGGCGTGGCCCCCAAGCTAAGTTGGGAGATGGAGCAACAGTTAGTTAACACTGCAAAGTCAGATATTTCCCGTTGA 666 0.5135 MEAQPQQSPCKSRFRRICVYCGSSPGKSPSYQLAAVQLGKQLVERKIDLVYGGGSIGLMGLISQVVYDGGRHVLGVIPNTLNAREITGESVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEIITWAQLGIHDKPVGLLNVDGYYNSLLAFMDKAVDEGFVTPAARHIIVSAQTAQDLMCKLEEYVPEHCGVAPKLSWEMEQQLVNTAKSDISR 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02381 221 FunFam CASP-like protein 5 191 - -
Vian4g02381 221 NCBIfam Rossman fold protein, TIGR00730 family 16 192 IPR005269 GO:0009691|GO:0016787
Vian4g02381 221 SUPERFAMILY MCP/YpsA-like 13 192 - -
Vian4g02381 221 PANTHER LOG FAMILY PROTEIN YJL055W 10 211 - -
Vian4g02381 221 Gene3D - 4 191 - -
Vian4g02381 221 Pfam Possible lysine decarboxylase 59 188 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02381 Vian-Chr4 40531509 40533438 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02381 K22522 - gmx:100782787 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02381 4 40531509 40533438 Vian4g02381 4 40531509 40533438 ECH