Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02378 ATGGGTTCCGTGTCTCTGAAAATAGGCGACGGCACTGCCAGATTCAAAAGTTCAACCGTGTGTTCCTCCGGAGTTAACATTCTCATGATCTTCTCCGTTATCACCACCAACCTCTTTGCCCTGTATGCCTTCTCTTCTTCCACAAAAGATCTTCACAACCACCACCTTCTTCACAAAAACTTCTCCCTAATCTCCGAACAAGTCACCCTCATTCTACGAGAGATCGACTTGTCGCAAAAGAAACTTGCCCAGATGGAAAAGGACCTCCTCGGCTACGAAAGCATTGACCTTTCCCGAAATAACACCTCCAACGAACTCAAACTCTTTCTCCACCGCCACCACCTTCCTCTGGGCAAAGACTCGAAAACTGGAATCACCGAAATGGTCTCGTCTGTGGGCCACTCCTGCGACAAATCCTCGGACTTGTTGTATCAGTACATGAATTACAAGGTTTCTGGACCCTGCCCCAATGATTTGAGTGTGGCACAGAAACTCGTTCTGAAAGGGTGTGAGCCTTTACCGAGAAGAAGGTGTTTTTCTAAAACCATTTCTAAGGTGGGTCTTCTACGCCCTTTTCCCACCTCGCTTTGGGAACCTCCGGTTAACAACACTGTTAACTGGAGTGGTTTAGGTTGCAAGAGTTTTGAGTGTTTGAAGGGTAAAAAGTTGAGTAGAGAGTGCATTGGTTGCTTTGATTTGGTTAATGGGTATGAAAATCAGAGGTTTGTGAAGTCTAGGAGTAAGAATGATTTTCTAGTTGATGATGTGTTGACTTTGGGAGGTGGTGGAATTAGGATAGGGCTTGATGTTGGAGGTGGGTCTGGGTCCTTTGGTGCTGTGATGGCCGAGAGGAATGTTACTGTGGTTACTACCACTTTGAATGTTGGTGCTCCATTCAGTGAATTCATTGCTGCAAGAGGACTTTTTCCTCTATATTTGAGCTTGGATCATAGGTTCCCGTTTTATGACAATGTGTTTGATTTGGTGCGTGCTGCGAGTGGTTTGGATGGTGGGGGGAGGCACGAGAAGTTGGAGTTTTTTATGTTTGACATTGATCGTGTTTTGCGGCCAGGTGGTTTGTTATGGCTTGATAACTTCTACTGTGTTGATGAAGAGAAGAAAAGGGTGTTAACCAGGTTGATTGAACGGTTTGGGTACAAAAAGTTGAAATGGGTTGTGGGAGAAAAGGTTGATAGTCTTGGATCAGGTAAGTCACAGGCAGTGTTATCAGCAGTGCTTCAGAAGCATGTTAGAGTGTAA 1260 0.4516 MGSVSLKIGDGTARFKSSTVCSSGVNILMIFSVITTNLFALYAFSSSTKDLHNHHLLHKNFSLISEQVTLILREIDLSQKKLAQMEKDLLGYESIDLSRNNTSNELKLFLHRHHLPLGKDSKTGITEMVSSVGHSCDKSSDLLYQYMNYKVSGPCPNDLSVAQKLVLKGCEPLPRRRCFSKTISKVGLLRPFPTSLWEPPVNNTVNWSGLGCKSFECLKGKKLSRECIGCFDLVNGYENQRFVKSRSKNDFLVDDVLTLGGGGIRIGLDVGGGSGSFGAVMAERNVTVVTTTLNVGAPFSEFIAARGLFPLYLSLDHRFPFYDNVFDLVRAASGLDGGGRHEKLEFFMFDIDRVLRPGGLLWLDNFYCVDEEKKRVLTRLIERFGYKKLKWVVGEKVDSLGSGKSQAVLSAVLQKHVRV 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02378 419 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 260 366 IPR004159 GO:0008168
Vian4g02378 419 Gene3D Vaccinia Virus protein VP39 236 410 IPR029063 -
Vian4g02378 419 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 249 389 IPR029063 -
Vian4g02378 419 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 24 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02378 Vian-Chr4 40475058 40476317 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02378 - - gmx:100798510 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02378 4 40475058 40476317 Vian4g02378 4 40475058 40476317 ECH