Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02369 ATGTCGGAAACGATTAGAGAAAACGACGTCGGATCAACGTTGAAAACGTCGAGAAGCTCCAGGTTCTGGCCTCGTTGGATTCCCACTTCCGTCGATGATATCATCGCTGCCGAGAAGCGCCTTCTCTCCGTCGTCAAAACCGGTTATGTTCAAGAGCACGTTAACATAGGTTCTGGTCCTCCTGGCTCCAAAGTGAGATGGTTCCGTTCAGCTAGTAGCGAGCCGCGGTTTATTCACAGCGTCACATTTGACAGTAAACCTGATGCTCCTACGCTTGTGATGATTCATGGTTATGCTGCTTCCCAGGGGTTCTTTTTTCGCAATTTTGATGTGCTTGCCTATCGATTTAGAGTCATTGCTGTTGATCAACTTGGCTGGGGTGCATCAAGCAGACCTGATTTTACTTGCAAAAGCACTGAAGAAACTGAGGCATGGTTCATTGATTCTTTTGAGGAATGGAGAAAAGCCAAAAATTTGAGCAATTTTATACTACTTGGACATTCTTTTGGTGGTTATGTTGCTGCTAAATATGCGCTCAAGCACCCTGAGCATGTACAACACTTGATTCTGGTTGGATCTGCTGGATTTTCATCAGAATCAGATGCAAAATCTGAGCGGATTACAAGGTTTCGAGCAACATGGAAGGGAGCAGTTTTGAACCATCTATGGGAATCTAATTTTACACCTCAAAAACTTGTCAGAGGTTTAGGTCCTTGGGGTCCCAACATAGTCCGCAAGTATACAAGTGCTAGGTTTGGTACACATTCTACTGGGGAAATACTAACAGAAGAGGAATCAACATTGCTGACAGATTATGTTTACCACACACTGGCGGCCAAAGCTAGTGGGGAGCTGTGCTTAAAATATATTTTTTCATTTGGAGCATTTGCTAGGATGCCCCTTCTTCTCAGTGCCTCCGAGTGGAAGGTGTCCACCACTTTCATATATGGTTTCGAAGACTGGATGAATTATCAGGGTGCCCAAGAAGCTCGTAAGCATATGAAGGTTCCATGCGAAATCATCAGGGTTCCTCGGGCCGGGCACTTTGTGTTCATTGACAACCCAACTGCCTTCCATTCAGCTGTTTTTTATGCTTGTCGAAGATTTTTTATTCCTGATTCAGACAACGAATCTCTTCCTAAAGGGTTAACCTTTGCATAG 1161 0.4444 MSETIRENDVGSTLKTSRSSRFWPRWIPTSVDDIIAAEKRLLSVVKTGYVQEHVNIGSGPPGSKVRWFRSASSEPRFIHSVTFDSKPDAPTLVMIHGYAASQGFFFRNFDVLAYRFRVIAVDQLGWGASSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGSAGFSSESDAKSERITRFRATWKGAVLNHLWESNFTPQKLVRGLGPWGPNIVRKYTSARFGTHSTGEILTEEESTLLTDYVYHTLAAKASGELCLKYIFSFGAFARMPLLLSASEWKVSTTFIYGFEDWMNYQGAQEARKHMKVPCEIIRVPRAGHFVFIDNPTAFHSAVFYACRRFFIPDSDNESLPKGLTFA 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02369 386 PRINTS Alpha/beta hydrolase fold signature 178 191 IPR000073 -
Vian4g02369 386 PRINTS Alpha/beta hydrolase fold signature 115 130 IPR000073 -
Vian4g02369 386 PRINTS Alpha/beta hydrolase fold signature 164 177 IPR000073 -
Vian4g02369 386 FunFam Probable 1-acylglycerol-3-phosphate O-acyltransferase 76 366 - -
Vian4g02369 386 SUPERFAMILY alpha/beta-Hydrolases 78 362 IPR029058 -
Vian4g02369 386 PANTHER RE40534P-RELATED 23 363 - -
Vian4g02369 386 Pfam alpha/beta hydrolase fold 90 204 IPR000073 -
Vian4g02369 386 Gene3D alpha/beta hydrolase 73 364 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02369 Vian-Chr4 40383474 40388777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02369 70 197 Acyl Lipid Metabolism Gene Families AT1G64670 30.657 3.79e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02369 - - gmx:100791981 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02369 4 40383474 40388777 Vian4g02369 4 40383474 40388777 ECH