Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02362 ATGGGAGCTCTGGCTACATTAGCCCCTTGGATTCCCGAGGACGATCTTTTGCTCAAGAACGCCGTTGAGGCGGGTGCTTCACTAGAGTCACTTGCCAAAGGTGCAGTGCAATTTTCTCGAAAATATAGTATCAGAGAGATACAAGATAGGTGGTATTCTCTCCTCTATGATCCTGTCATTTCTGCAGAAGCTTCTGCGGGTATGACAAACTTTGAGCTTTCAGCTTCGCCTCTCCCATCGAAGTTTTACAGGTTTGGACATTCCAAGGAACATAAAGTTGTTTCAGCTAAGAGAAAGTCTGGAAGTGTTCGCAATTTGTATTATGCAAGGTGCAAAAGAATTCGAAATAGCATGTTAACTTCCATGGACTTGAGTTTTCTAGTGGATCCGGGAAATAGTAATTATGCAGAGCATGAACTTCACCCCTTATCTGGAACCTGCGTGCCTGAAGGTGGAACTTTAAATCTCCCTGTTCAGTATGATTTTCCTCCTGAAAATGTGATGGATGATAACGTGGTTTCTGATGGAGTTACTGCCAGTGTGTTTTTCCCTGGAGTTGAAAGGGCAGTTGAAGAGAATTTTCCTGCCAAGCTAAATAATGTACTTAAGGAAGAACCTCATTTTATTGGAGACAACGTGCCTTTGGATGAAGCTGTTGAGGAATTGGATGTTCCTGGAGAATTGACTATTGATGGGTGGATTGGTGACGATAATTTAGAGAGAATACCTTTGCCCACATTAGATGACATCAACAATGACCCTGGAAATATGTGTCCTGATTTTGATGAAAAATGTGCATTTGATTCTGAGTTAGAGTGCGGAACTTCATTTAACTTGGCTTCACTTCCTGAAATACCAGTCTGGAGTACAGATGAGGGCATCAAAGAGTCTGATATGCCATGCGATGGTTTTAATGATTCGATTGCTTGTGGGGGTGCTTATTTGGAAGAACTGTCCAATTCTCTCCTCAACTTTAGTAGTGAGGAAGAGCTCTTTCTGATGGATGTTGATGGAGAAGAAGGGATTGACAAATCTTACTTGGATGGTTTGAGTTCGCTCCTACTAAATTCTACAAATGATGTTAATCCAAGTCAAGTCCCTAAAAAGGATGAAGCAGAGCTGCAAGTCCCTAAAACAGATGGAACAGAGTCGTTAATGGCCTCACAGGCACATGTTCTAAATCATTCAGTTTCATGTCACAAAGAGTTAGAAGACAACCAAGGGTCAACCTCTAGTGGTGTACAAGTAGTTCACAAATTAGAGTTCCAAATGCCATCTCCTCCCTTGGCTGAAGATTCCCTCTTTCATGAACTAATTAACGAAGTTCCTTCCTGTTCCCTAAACACTGAGGAACAAGAAATTCCAGATAATGAAGACGTTTTCCTACCGTTTGATGTGCCTCCTGTCATATTTCCCCCTTCATCTAAATTGATTTTTAAAGCATCCAAGAAACCAATTTCGTCATCTGTTCAGGATTATGGATTTAATAGGCATAGAGCTAACGGAAGAGGCAAAGTTCTGATGCATGTAGAGAAGAAAATCCGTGTAGAATCTCAATCATCTTCTCAGATGATGGGATCACCTTGCTTCCTGGTACCTGATGGTGGTTCTAAGGTAAAATGCGAGTTGCCTGCTAATCACGCATCACACATAGTATCTACGAGTTCTGTTACTGTTTCTGGTGGCTTAGGTGGAAATGGTGCTGCAAACACTACAATTGCTCCTCTGCATGCAAATAAAAAGGAAGAAGCTACCAATGCTGACTTGGCAAAGGATCAATGCAATCATATGGCAAATCCTTTCATTAAGAAATCAGCAGGTAGTTCGAATGACTTACAAAATAATCCCCAATTTCATGGTTCTAGCATGAAGAATGAACAAGATATAGGTTTGTCACTTCAAGATCACCAGTTGAAATGTGCTGAAGTTGGATCCTCAGATGTTCTTGACTCAGAGCTGGTGGCAGACCCTCTAACACTAGATGAGGAAGAGCATGATATAGACAGCGACGATGAGCTTCCTTCTTATTCTGACGTAGAAGCAATGGTACTTGATATGGATTTGGATCCTGATGATCATCAGGATTCTTGTTATAGTGAGGAAGTATCAAGATATCAACATGTGGAAAGTAAGCGAGCTATCATGAGGCTGGAACAGGGTGCCCATTCTTGTATTCAGAGAGCCATTAATGCACATGGAGCATTTGCCATCTTATATGGTCGCCACTCAAAGCATTATATTAAGAAACCCGAGGTTCTACTTGGTCGAGCGACGGAAGGTTTTCCTGTGGACATTGACTTGAGCAAAGGAGGGTATAGCAATTCAATATCTCGACGTCAGGCAATTATAAAGATGGATAAAGAGGGATCATTCTACATAAAAAACTTCGGCAAGAGTTCAATCCTGGTAAATAGCAAAGAAGTGCACACTGGTCAGTCTCAAAGACTGCATACTAATTATCTAATTGAGGTAAGGGGCATACCTTTGATATTTGAGATAAATCAAAATCGTGTCAAGCGGTACCTGGATCACATTTCTGACAATTCACAAACCTTTTAG 2559 0.4127 MGALATLAPWIPEDDLLLKNAVEAGASLESLAKGAVQFSRKYSIREIQDRWYSLLYDPVISAEASAGMTNFELSASPLPSKFYRFGHSKEHKVVSAKRKSGSVRNLYYARCKRIRNSMLTSMDLSFLVDPGNSNYAEHELHPLSGTCVPEGGTLNLPVQYDFPPENVMDDNVVSDGVTASVFFPGVERAVEENFPAKLNNVLKEEPHFIGDNVPLDEAVEELDVPGELTIDGWIGDDNLERIPLPTLDDINNDPGNMCPDFDEKCAFDSELECGTSFNLASLPEIPVWSTDEGIKESDMPCDGFNDSIACGGAYLEELSNSLLNFSSEEELFLMDVDGEEGIDKSYLDGLSSLLLNSTNDVNPSQVPKKDEAELQVPKTDGTESLMASQAHVLNHSVSCHKELEDNQGSTSSGVQVVHKLEFQMPSPPLAEDSLFHELINEVPSCSLNTEEQEIPDNEDVFLPFDVPPVIFPPSSKLIFKASKKPISSSVQDYGFNRHRANGRGKVLMHVEKKIRVESQSSSQMMGSPCFLVPDGGSKVKCELPANHASHIVSTSSVTVSGGLGGNGAANTTIAPLHANKKEEATNADLAKDQCNHMANPFIKKSAGSSNDLQNNPQFHGSSMKNEQDIGLSLQDHQLKCAEVGSSDVLDSELVADPLTLDEEEHDIDSDDELPSYSDVEAMVLDMDLDPDDHQDSCYSEEVSRYQHVESKRAIMRLEQGAHSCIQRAINAHGAFAILYGRHSKHYIKKPEVLLGRATEGFPVDIDLSKGGYSNSISRRQAIIKMDKEGSFYIKNFGKSSILVNSKEVHTGQSQRLHTNYLIEVRGIPLIFEINQNRVKRYLDHISDNSQTF 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02362 852 Pfam N-terminal region of micro-spherule protein 10 72 IPR025999 -
Vian4g02362 852 ProSiteProfiles Forkhead-associated (FHA) domain profile. 752 808 IPR000253 GO:0005515
Vian4g02362 852 Gene3D - 696 844 - -
Vian4g02362 852 SMART FHA_2 751 808 IPR000253 GO:0005515
Vian4g02362 852 FunFam Microspherule protein 1 695 844 - -
Vian4g02362 852 CDD FHA_MCRS1 731 834 - -
Vian4g02362 852 PANTHER MICROSPHERULE PROTEIN 1 7 850 IPR037912 GO:0002151|GO:0031011|GO:0071339
Vian4g02362 852 SUPERFAMILY SMAD/FHA domain 731 834 IPR008984 GO:0005515
Vian4g02362 852 Pfam FHA domain 753 823 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02362 Vian-Chr4 40330704 40336030 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02362 - - gmx:100786493 1219.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02362 4 40330704 40336030 Vian4g02362 4 40330704 40336030 ECH