Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02360 ATGCGCCCACTTGCACATTCCTATTGCTTATGTTCTAATCTAACCTTCCCCTACAAAACCCTTGCATTTGCACGAGGAATTCCCTGGTACGTCACAGAAATTCTTCTCTTTGCGAAAGTGTTGGACAACGTGGGCATGGCAACTCAAGGTTCCCGATCCCAGATTGAACTTGTAGTAGACACGACCACGACCACCTCAACCGTTTCCAACAGTTTTAGCAACTACCAACACTCAACCTCTTCCACAACGCTCCTAATCTCTGTTCTGACCAAGTTGCATGCAGGCTACTTCAGAATAAGCCTCTCCCTCGGAAGCCAAGCATTACTGTGGAAGACGATAATCACATCGGAAGAAGACACAACCACTCTACCGCACGTGCTTTCCACGCTTCCTTCAGCGGCTGTCTATGCACTCTGGTCTCTCTCCCTTTTCACTCTAGTGTTACTCTCCCTTCTATACCTCCTGAGGTGCTTTTTTTTCTTTAAAATGGTGAAGGCCGAGTTCTTGCACCCTGTAGGGGTTAACTACCTCTTCGCTCCCTGGATCTCGTGGCTTCTCTTGCTTGAATCAGCGCCGTTCGTGGCGCCCAAAACCGCCTTGTACTTTGTTCTGTGGTGGGTGTTTGCGGTCCCGATGATGGTGCTTGACGTGAAGATCTACGGGCAGTGGTTGACTAAGGGAAAGAGGGTTTTGTCCTCTGCGGCGGGGAACCCCACGAGCCAGTTGTCGGTGATAGGGAACTTGGTGGGGGCACAGGCTGCTGCGCACATGGGGTGGAAAGAGTGTGCGCTGTGGTTGTTTTCGGTGGGGATGGTGCATTACGTGGTGCTTTTTGTTACCCTTTATCAGCGATTATCGGGTAGAGATGGGGTTCCGGTGTTGTTAAGGCCAGTTTTGTTCTTGTTCATTGCAGCGCCTAGCGTAGCAAGCTTGGCTTGGGAATCCATTGTTGGAACCTTTGACACTGCTTCCAAGATGCTCTTTTTTCTTTCCCTCTTCCTCTTCACCTCACTGATTTGCAGGCCAAAGCTGTTCAGAAGATCAATGAAAAGGTTCAACGTTGCATGGTGGGCTTACTCATTTCCCATTACTGTACTTGCTCTTGTTTCAACGGATTATGCAGAAGAAGTGAAAGGAACTTTTTCTCACATCCTAATGCTCCTTCTGTTGGCTCTTTCAGTTCTTGTCTCTTTTGCTCTCACCATGTTTACTCTCCTCAACTCTAACATGCTTCTACCGGATACATATATATAG 1254 0.4841 MRPLAHSYCLCSNLTFPYKTLAFARGIPWYVTEILLFAKVLDNVGMATQGSRSQIELVVDTTTTTSTVSNSFSNYQHSTSSTTLLISVLTKLHAGYFRISLSLGSQALLWKTIITSEEDTTTLPHVLSTLPSAAVYALWSLSLFTLVLLSLLYLLRCFFFFKMVKAEFLHPVGVNYLFAPWISWLLLLESAPFVAPKTALYFVLWWVFAVPMMVLDVKIYGQWLTKGKRVLSSAAGNPTSQLSVIGNLVGAQAAAHMGWKECALWLFSVGMVHYVVLFVTLYQRLSGRDGVPVLLRPVLFLFIAAPSVASLAWESIVGTFDTASKMLFFLSLFLFTSLICRPKLFRRSMKRFNVAWWAYSFPITVLALVSTDYAEEVKGTFSHILMLLLLALSVLVSFALTMFTLLNSNMLLPDTYI 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02360 417 PANTHER S-TYPE ANION CHANNEL SLAH3 76 414 IPR030183 GO:0006873|GO:0008308|GO:0016020
Vian4g02360 417 Gene3D - 85 412 IPR038665 -
Vian4g02360 417 CDD TDT_SLAC1_like 92 384 - -
Vian4g02360 417 FunFam S-type anion channel SLAH1 86 412 - -
Vian4g02360 417 Pfam Voltage-dependent anion channel 92 405 IPR004695 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02360 Vian-Chr4 40314894 40317390 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02360 K26672 - gmx:100787036 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02360 4 40314894 40317390 Vian4g02360 4 40314894 40317390 ECH