Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02352 ATGGACCTCGATCCTCGTCAATACGAAAACGTTGCTATAAATGATAATGACATCCACAGTGTTGTTCTGTCATATCTCATACACAATTGCTACAAAGAATCGGTAGAATCATTCATTACTAGCACTGGGACAAAGCAGCCTGCAGATTATTTGGAGGACATGGACAAAAGGAAAAGAATCTTTCACTTTGCACTAGAGGGAAATGCACTCAAGGCCATTGAGCTTACTGAGCAGCTAGCACAGGATATTTTAGAGAAGAATAAGGATTTGCAGTTTGATCTACTAAGCCTTCATTTTGTTGAGCTTGTGTGCTCCAGGAAATGCACAGAAGCTTTGGAGTTTGCTCAGACCAAGCTGGGCCCTTTTGGAAAGGAGCCCAAATATATGGAAAAACTTGAATTATGGTACCGGCAGGATTTTATGGCCCTTCTTGCTTATAAGGAGCCAGAGAAATCCCCAATGTTTCATCTCCTTAGCTTAGAGTATCGGCAGCAGGTTGCAGATAGTTTGAATCGGGCTATTCTTGCACACTTGAATCTTCCCAGATACACAGCAATGGAGAGGCTAATACAGCAGGCTACAGTTGTTAGACAATGCTTAAGTCAAGAAGCGGGCAAGGATGGGCCTCCACCATTTTCCTTAAAGGATTTTCTCAAAAGTTGA 663 0.4238 MDLDPRQYENVAINDNDIHSVVLSYLIHNCYKESVESFITSTGTKQPADYLEDMDKRKRIFHFALEGNALKAIELTEQLAQDILEKNKDLQFDLLSLHFVELVCSRKCTEALEFAQTKLGPFGKEPKYMEKLELWYRQDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRAILAHLNLPRYTAMERLIQQATVVRQCLSQEAGKDGPPPFSLKDFLKS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02352 220 SMART toby_final6 106 206 IPR013144 -
Vian4g02352 220 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 53 110 IPR006595 -
Vian4g02352 220 ProSiteProfiles LIS1 homology (LisH) motif profile. 14 46 IPR006594 GO:0005515
Vian4g02352 220 Pfam CTLH/CRA C-terminal to LisH motif domain 54 197 IPR024964 -
Vian4g02352 220 PANTHER RAN BINDING PROTEIN 9-RELATED 7 205 - -
Vian4g02352 220 SMART ctlh 53 110 IPR006595 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02352 K23338 - gmx:100800484 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02352 4 40219877 40222586 Vian4g02352 4 40219877 40222586 ECH