Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02350 ATGGCATTCCCACAGCTTATCCCTTCTCCCACTTCTTCTTCTTTACCTCACAAACCCTCCTCAAACCCTATAACACTCTCCCTAAACCCTAAATCCTCAAACTCTCTGCACCATCTCAATCTCGCCGTTCTCCGCCACCGCTGCCGGAAACTTAATTCCACTCTCCGCTGCTCTGCCTCTTCCTTCTCCGAGAAGCACCACCCCAACTCCCCCAACTCCGATGACGTCGTCGAGCTTCCTCTCTTCCCTCTCCCTCTGGTGCTTTTCCCCGGCGCCATCCTCCCCTTGCAGATCTTCGAGTTCCGCTACCGCATCATGATGCACACACTCCTTCAAACAGACCTCCGCTTCGGCGTCATCTACACGGATGCCGTCTCCGGAACCGCCGCCGTTGGCTGCGTCGGCGAAGTCATAAAGCATGAGCGCCTCGTGGATGACCGCTTTTTCCTCATCTGTAAGGGCCAGGAACGGTTCCGAGTGAACAGTGTGGTGCGCACGAAACCCTACCTGGTCGCGCAGGTGACGTGGCTCGAGGACCGGCCATCTCCCTCCACCGACCTCGATCTGGACGGGTTGGCCACCGAGGTGGAGACCTACATGAAGGACGTTATCCGGTTATCCAACCGGTTGGGAGGGAAACCGGAGAAGGAGGTTGGGGATTTGAGAAGAAACCTGTTTCCAACGACGTTCTCGTTCTTCGTTGGCAGCACCTTCGAGGGCGCGCCAAGGGAGCAACAAGCGCTGCTTGAATTGGAGGACACCGCCGCCAGATTGAAGAGGGAGAAGGAAACATTGAAGAACACTCTTAATTACCTCACTGCTGCTTCTGCTGTTAAAGATGTTTTTCCCTCTTCTTCCAATTCTTCTTGA 870 0.5517 MAFPQLIPSPTSSSLPHKPSSNPITLSLNPKSSNSLHHLNLAVLRHRCRKLNSTLRCSASSFSEKHHPNSPNSDDVVELPLFPLPLVLFPGAILPLQIFEFRYRIMMHTLLQTDLRFGVIYTDAVSGTAAVGCVGEVIKHERLVDDRFFLICKGQERFRVNSVVRTKPYLVAQVTWLEDRPSPSTDLDLDGLATEVETYMKDVIRLSNRLGGKPEKEVGDLRRNLFPTTFSFFVGSTFEGAPREQQALLELEDTAARLKREKETLKNTLNYLTAASAVKDVFPSSSNSS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02350 289 ProSiteProfiles Lon N-terminal domain profile. 79 267 IPR003111 -
Vian4g02350 289 Coils Coil 241 275 - -
Vian4g02350 289 Gene3D - 76 179 IPR046336 -
Vian4g02350 289 SMART lon_5 78 267 IPR003111 -
Vian4g02350 289 SUPERFAMILY PUA domain-like 78 266 IPR015947 -
Vian4g02350 289 MobiDBLite consensus disorder prediction 1 23 - -
Vian4g02350 289 Pfam ATP-dependent protease La (LON) substrate-binding domain 78 266 IPR003111 -
Vian4g02350 289 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 21 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02350 Vian-Chr4 40210885 40211754 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02350 - - gmx:100807718 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02350 4 40210885 40211754 Vian4g02350 4 40210885 40211754 ECH