Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02349 ATGGCGGAAGAGGGACAAGTTATCGGTGTCCACTCCGTGAGTGAGTGGAAGGAACATCTCCAGAAGGGAAAAGAGACCGGCAAGCTGATTGTGGTGGATTTCACTGCTTCTTGGTGCGGTCCATGCCGATTCATTGGTCCAGTCCTAGTTGAGATTGCTAAAAAGATGACCCATGTCACCTTTCTCAAAGTTGATGTAGATGAACTCGAGTCTGTTTCAAGAGAGTGGGAGATTGAAGCTATGCCAACCTTCCTGTTCTTGAAAGAAGGCAAGCTGGTGGACAAGGTTGTGGGAGCCAAGAAAGAGGAGCTGCACGCGAAAATAATCGAGCATGCAAATGCTGCTGCTGGTAGTTCCATATGA 363 0.4821 MAEEGQVIGVHSVSEWKEHLQKGKETGKLIVVDFTASWCGPCRFIGPVLVEIAKKMTHVTFLKVDVDELESVSREWEIEAMPTFLFLKEGKLVDKVVGAKKEELHAKIIEHANAAAGSSI 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02349 120 ProSitePatterns Thioredoxin family active site. 31 49 IPR017937 -
Vian4g02349 120 FunFam Thioredoxin 6 113 - -
Vian4g02349 120 SUPERFAMILY Thioredoxin-like 4 112 IPR036249 -
Vian4g02349 120 PANTHER THIOREDOXIN 7 108 - -
Vian4g02349 120 Pfam Thioredoxin 10 108 IPR013766 -
Vian4g02349 120 PRINTS Thioredoxin family signature 38 47 - -
Vian4g02349 120 PRINTS Thioredoxin family signature 30 38 - -
Vian4g02349 120 PRINTS Thioredoxin family signature 77 88 - -
Vian4g02349 120 CDD TRX_family 18 108 - -
Vian4g02349 120 ProSiteProfiles Thioredoxin domain profile. 1 114 IPR013766 -
Vian4g02349 120 Gene3D Glutaredoxin 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02349 Vian-Chr4 40202689 40203973 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02349 K03671 - gmx:100499879 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02349 4 40202689 40203973 Vian4g02349 4 40202689 40203973 ECH