Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02331 ATGGCTGTGATCCCATGTCACTGTTACCGTACCGTCGCATCAGACAAACCCTACCTCTCCGGTCACAATCTCCGCCATCGCGCTCCTTTCCCCTCCTCCTCCGTTTCATTCCGCCGCCGAATATCGTGCGTCGCCTCTCCCGCAGTCACTCAGAAAGTTGCGTTGAAAGATTTTCTTCACATAGATGATTTTGATAAGGACACTATTTTGAAGATGCTGGATCGGGCCATTGAGGTAAAGGCGTTGCTTAAATCAGGGGACAGGTCCTTTCGACCTTTCGAGGGGAAGACCATGTCGATGATATTTACAAAGCCATCCATGAGAACGAGGGTTTCGTTCGAGACTGGCTTTTCGTTGTTAGGGGGGCATGCCATATACTTAGGACCTGATGATATCCAAATGGGCAAGCGAGAGGAGACTCGTGATATTGCTCGTGTTCTGTGTCGCTATAATGACATCATTATGGCTCGTGTTTTTGCCCATCAGAAAAAGCTTGAGTATAAATCCCTGCCAGGATCATTGCCATTGCTTGTGGTAGACAAGAATTTGTGTCCCGTGCCATTGGACATACTTGATCTTGCAAAATATGCAACTGTGCCAGTCATCAATGGGTTGACGGACTACAACCATCCCTGCCAGATAATGGCTGATGCCCTTACTATGATTGAACACATTGGTCGGTTTGAAGGTACCAAGGTTGTCTACGTTGGAGATGGAAATAATATTGTTCACTCATGGCTGTTGATGGCATCTGTGATTCCATTTCACTTTGTTTGTGCTTGTCCGAAAGGATTTGAACCTGATGCAAAAACAGTTGAGAAGGCAAGGAAAGCTGGAATCAGCAAGATTGAGATAACTAATGACCCCAAAGAAGCTGTTAAAGGAGCCGATGTTGTGTATTCAGATGTCTGGGCCAGCATGGGGCAAAAGGAAGAAGCTGAACACCGGCGCCAAGTGTTTAAAGGTTTTCAGGTAAACAAAGATCTGATGGAAATGGCTGGTTCAAAGGCATTTTTCATGCATTGCTTACCAGCGGAAAGAGGGGTGGAGGTGACTGACGAAGTTATTGAAGCTCCAAATTCAATAGTCTTCCCGCAAGCTGAGAACCGAATGCATGCACAAAATGCCATAATGCTTCATGTTCTCGGCAAGTAG 1155 0.4615 MAVIPCHCYRTVASDKPYLSGHNLRHRAPFPSSSVSFRRRISCVASPAVTQKVALKDFLHIDDFDKDTILKMLDRAIEVKALLKSGDRSFRPFEGKTMSMIFTKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDIARVLCRYNDIIMARVFAHQKKLEYKSLPGSLPLLVVDKNLCPVPLDILDLAKYATVPVINGLTDYNHPCQIMADALTMIEHIGRFEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDAKTVEKARKAGISKIEITNDPKEAVKGADVVYSDVWASMGQKEEAEHRRQVFKGFQVNKDLMEMAGSKAFFMHCLPAERGVEVTDEVIEAPNSIVFPQAENRMHAQNAIMLHVLGK 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02331 384 Gene3D Aspartate/ornithine carbamoyltransferase 213 378 IPR036901 GO:0006520|GO:0016597|GO:0016743
Vian4g02331 384 SUPERFAMILY Aspartate/ornithine carbamoyltransferase 53 383 IPR036901 GO:0006520|GO:0016597|GO:0016743
Vian4g02331 384 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 335 344 IPR006130 GO:0006520|GO:0016597|GO:0016743
Vian4g02331 384 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 347 370 IPR006130 GO:0006520|GO:0016597|GO:0016743
Vian4g02331 384 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 102 121 IPR006130 GO:0006520|GO:0016597|GO:0016743
Vian4g02331 384 Gene3D Aspartate/ornithine carbamoyltransferase 56 212 IPR036901 GO:0006520|GO:0016597|GO:0016743
Vian4g02331 384 FunFam Ornithine carbamoyltransferase 213 369 - -
Vian4g02331 384 Pfam Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 229 380 IPR006131 GO:0006520|GO:0016597|GO:0016743
Vian4g02331 384 Hamap Ornithine carbamoyltransferase, catabolic [argI]. 55 383 IPR024904 GO:0004585|GO:0006591
Vian4g02331 384 PRINTS Ornithine carbamoyltransferase signature 133 146 IPR002292 GO:0016743
Vian4g02331 384 PRINTS Ornithine carbamoyltransferase signature 299 309 IPR002292 GO:0016743
Vian4g02331 384 PRINTS Ornithine carbamoyltransferase signature 100 114 IPR002292 GO:0016743
Vian4g02331 384 PRINTS Ornithine carbamoyltransferase signature 361 372 IPR002292 GO:0016743
Vian4g02331 384 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL 51 384 - -
Vian4g02331 384 Pfam Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 56 223 IPR006132 GO:0006520|GO:0016743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02331 K00611 - gmx:100796780 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02331 4 40057679 40060567 Vian4g02331 4 40057679 40060567 ECH