Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02318 ATGGGCGAACACACGCTAGGTCAAGCACAATCCCTAATCGAACCTCAACCCCACCCAGCTCCCTCCTCCTCCGCCGCTGGCCCCGACGGCGCTCAGGCGGACTCAGAACTAAACAATGTCCTTCCGCACGTAAACTCCCCTGCCTCCAAAATCCCCCTCCGTCCCCGTAAGATCCGGAAGGTCTCACCGGACCCTTCCACATCCGAATCCCTAACCGAACCCTCTAAACCGGGCAAGAGCGGCGGCCGGAGCACCAAGCATGTTCCGCCTTCGCGAGCCATGGCGGTGGTGCCGCGCTTAGTGGCGCGTTCACTCTCGTGTGAAGGCGAGGTGGAGATCGCGCTCCGATTTCTCAGGAACGCGGACCCTCTTCTCTCTCCTCTTATCGACATTCACCAACCCCCAACCTTCGACAATTTCCACACTCCCTTCCTCGCCCTAACGCGTAGCATCTTGTACCAGCAACTCGCGTACAAAGCAGGCACCTCCATCTACACGCGCTTCATCGCGCTCTGCGGTGGCGAAAACGGCGTCGTTCCCGAAACCGTTCTCGCTTTGACTCCCCAACAGCTTCGCCAAATTGGGGTTTCGGGGCGGAAGGCGAGTTACCTTCACGATTTGGCGAGGAAGTACCAGAACGGGATACTGTCCGATTCGACCATTGTGAACATGGATGATAAGTCACTCTTCACTATGCTAACCATGGTCAATGGAATTGGCTCTTGGTCTGTTCACATGTTCATGATTTTTTCCCTCCACAGACCCGATGTTCTCCCCATCAATGATTTGGGTGTGAGGAAAGGGGTTCAGCTTCTTTATAACCTCGAGGACTTGCCGCGGCCGTCGCAGATGGACCAATTGTGTGAGAAGTGGAGGCCTTATCGTTCTGTTGCGTCGTGGTATATGTGGAGATTTGTTGAAGCCAAAGGAACTCCTTCTAGTGCTGTGGCAGTAGCCACTGGTGCCGGCTTGCAGCACCAGCATCACCACCAGCACCAACAACATGAGCAACAGCAGCAACAGCAACAGCAACATCCTCCACAGCCGCAGCTTCTGGACCCCATAAATAGTATGTTTAATCTCGGGGCCGCCTGTGCTTGGGGACAATGA 1110 0.555 MGEHTLGQAQSLIEPQPHPAPSSSAAGPDGAQADSELNNVLPHVNSPASKIPLRPRKIRKVSPDPSTSESLTEPSKPGKSGGRSTKHVPPSRAMAVVPRLVARSLSCEGEVEIALRFLRNADPLLSPLIDIHQPPTFDNFHTPFLALTRSILYQQLAYKAGTSIYTRFIALCGGENGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSTIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYNLEDLPRPSQMDQLCEKWRPYRSVASWYMWRFVEAKGTPSSAVAVATGAGLQHQHHHQHQQHEQQQQQQQQHPPQPQLLDPINSMFNLGAACAWGQ 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02318 369 MobiDBLite consensus disorder prediction 336 353 - -
Vian4g02318 369 MobiDBLite consensus disorder prediction 1 91 - -
Vian4g02318 369 Pfam HhH-GPD superfamily base excision DNA repair protein 149 292 IPR003265 GO:0006284
Vian4g02318 369 SUPERFAMILY DNA-glycosylase 133 305 IPR011257 GO:0003824|GO:0006281
Vian4g02318 369 MobiDBLite consensus disorder prediction 64 79 - -
Vian4g02318 369 Gene3D Hypothetical protein; domain 2 141 254 - -
Vian4g02318 369 Gene3D - 118 304 - -
Vian4g02318 369 FunFam DNA-3-methyladenine glycosylase II 140 254 - -
Vian4g02318 369 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 20 315 - -
Vian4g02318 369 SMART endo3end 152 307 IPR003265 GO:0006284
Vian4g02318 369 CDD ENDO3c 144 305 IPR003265 GO:0006284
Vian4g02318 369 MobiDBLite consensus disorder prediction 320 353 - -
Vian4g02318 369 FunFam Probable DNA-3-methyladenine glycosylase 2 239 304 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02318 K01247 - gmx:100790760 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02318 4 39995838 39999553 Vian4g02318 4 39995838 39999553 ECH