Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02302 ATGGAGTCGGAGCTCAAAGACCTCAATTCCAAGCCTCCCAACGGCAGTTCCGCCAGGGATGACCGTCCTCTCCTCAAGTCCGAGTCTCTAGCCTCCGCTGACAGCATCGCCGAGATGGAAAAGAAGTTCGCTGCATACGTTCGCCGCGACATCTACGGCACCATGGGACGCGGCGAGTTGCCCCCGAAGGAGAAGCTCTTGCTCGGTTTCGCGTTGGTCACTCTTCTCCCTATCAGAGTTCTTCTCGCGTTCACCGTATTGCTCTTCTATTACTTAATTTGTAGGGTTTGTACTCTATTCTATGCGCCCAATCGCGAAGATGAACAAGAAGATTACGCTCACATGAGTGGCTGGAGGAGAGCGGTTATTGTTTCCTGTGGACGCGCTCTGTCTAGAGTCATGCTCTTCATCTTTGGCTTTTATTGGATCCCCGAATCTAACTCTGCTTCTCAGGAAGACAAGCAACAGCCTGAAGAGTCGGACAGACCTGGTGTAATAATATCTAACCACGTGTCATACCTGGACATTTTGTATCACATGTCATCCTCGTTCCCTAGTTTTGTTGCTAAGAAATCAGTGGCTAGACTTCCTCTCGTTGGTCTCATCAGTAAGTGCCTTGGTTGTGTCTATGTTCAGCGGGAATCAAAGTCATCAGACTTCAAGGGTGTTTCAGCTATTGTCACTGATAGAATTCGAGAAGCTCATCAGAATGAGTCCGCTCCATTAATGATGTTATTTCCAGAAGGTACAACCACAAATGGAGAGTTCCTCCTTCCATTCAAAACTGGTGGTTTTTTGGCAAAGGCACCAGTACTTCCTGTGATTTTAAGATATCATTACCAGAGATTTAGCCCTGCCTGGGATTCCATATCTGGGGTGAGGCATGTGATATTTCTCCTATGTCAATTTGTAAATTTTATAGAGGTGATCCGATTACCTGTTTACCATCCTTCACAACAGGAGATGGATGACCCCAAACTTTATGCCAATAATGTTAGAAGATTGATGGCTTCTGAGGGTAATTTGACACTTTCTGATATTGGGCTTGCTGAAAAACGAACATATCATGCTGCTCTCAATGGTAATAATAGCCTGCCTAGTGTTTTGCATCAGAAAGACGAATGA 1125 0.4578 MESELKDLNSKPPNGSSARDDRPLLKSESLASADSIAEMEKKFAAYVRRDIYGTMGRGELPPKEKLLLGFALVTLLPIRVLLAFTVLLFYYLICRVCTLFYAPNREDEQEDYAHMSGWRRAVIVSCGRALSRVMLFIFGFYWIPESNSASQEDKQQPEESDRPGVIISNHVSYLDILYHMSSSFPSFVAKKSVARLPLVGLISKCLGCVYVQRESKSSDFKGVSAIVTDRIREAHQNESAPLMMLFPEGTTTNGEFLLPFKTGGFLAKAPVLPVILRYHYQRFSPAWDSISGVRHVIFLLCQFVNFIEVIRLPVYHPSQQEMDDPKLYANNVRRLMASEGNLTLSDIGLAEKRTYHAALNGNNSLPSVLHQKDE 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02302 374 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 33 361 - -
Vian4g02302 374 CDD LPLAT_LPCAT1-like 132 353 IPR045252 GO:0008374
Vian4g02302 374 SMART plsc_2 164 279 IPR002123 GO:0016746
Vian4g02302 374 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 71 344 - -
Vian4g02302 374 Pfam Acyltransferase 158 274 IPR002123 GO:0016746
Vian4g02302 374 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02302 Vian-Chr4 39862693 39867949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02302 1 361 Acyl Lipid Metabolism Gene Families AT1G80950 64.599 6.70e-180 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02302 K13510 - gmx:100820536 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02302 4 39862693 39867949 Vian4g02302 4 39862693 39867949 ECH
Vian7g00801 7 16312672 16319144 Vian4g02302 4 39862693 39867949 PCT