Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02301 ATGCCCGAACCGCGACTCGCTCTGAAACCCGCCGGAAACGTGCCCAAACACGAGAACCAGAACCACGTAAAGACTCCACAGCGCTTGAGAAACCTGGCACCGCAAATTCCAAATGTCGTTGCGCAAAGCACCGTGTCTTTGGACAGCACGTGTTCCTCGGATTCGTGTTCAAGCAACTCACTAACCAAAAGGGTGAATCCCGCAACTGCAAGCAGAAGAAGCGTGAACCGTAACGGCCTTAAGCCGGTTAGGGTTGTGCCCGACGCCGTGGACGTAGCCACTACTGTGTCTCCGCCTCCCAAGAGATGTGAATGGATCACTCAACATTCTGATCCCCTTTACACTGCTTTCCATGACGAAGAATGGGGTGTTCCAGCTAACAATGATAGAAAGCTCTTTGAACTTCTGTGTTTTAACATATGCCGCAGGAAGCTTTTTGAAAATTTTGACCCATCATCAGTTGCACAGTTTACTGAAAAGAAATTGCTAACCCTGAAAATAAACGACAGCTCATTGTTATCAGAGCCAAAGCTCCGTGCCATTGTGGAAAATGCTAAACAATTACTTAAGGTTCAGCAGGAGTTTGGCTCGTTCAGCAATTACTGCTGGAGATTTGTTAACCACAAACCGATAAGAAATGAATTCAGATATGGACGTCAAGTACCAGTAAAGACTCCAAAAGCAGAAGTCATAAGCAAGGACATGATGCGTAGAGGTTTCCAATGTGTGGGACCGACTGTGATTTATTCGTTCATGCAAGTAGCAGGACTTGTTAATGACCACCTCTTGACATGCTTCAGGAACCAAGAATGCAATGTCACAACCAAAAAGGAATTTAAAACCGAGGTTAAGAAGAATAAGGTACAAAATGAAACTTCGGAGCTGACATAA 891 0.4534 MPEPRLALKPAGNVPKHENQNHVKTPQRLRNLAPQIPNVVAQSTVSLDSTCSSDSCSSNSLTKRVNPATASRRSVNRNGLKPVRVVPDAVDVATTVSPPPKRCEWITQHSDPLYTAFHDEEWGVPANNDRKLFELLCFNICRRKLFENFDPSSVAQFTEKKLLTLKINDSSLLSEPKLRAIVENAKQLLKVQQEFGSFSNYCWRFVNHKPIRNEFRYGRQVPVKTPKAEVISKDMMRRGFQCVGPTVIYSFMQVAGLVNDHLLTCFRNQECNVTTKKEFKTEVKKNKVQNETSELT 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02301 296 MobiDBLite consensus disorder prediction 52 76 - -
Vian4g02301 296 MobiDBLite consensus disorder prediction 52 78 - -
Vian4g02301 296 SUPERFAMILY DNA-glycosylase 101 271 IPR011257 GO:0003824|GO:0006281
Vian4g02301 296 PANTHER OS04G0501200 PROTEIN 35 278 - -
Vian4g02301 296 MobiDBLite consensus disorder prediction 1 28 - -
Vian4g02301 296 Pfam Methyladenine glycosylase 107 267 IPR005019 GO:0006284|GO:0008725
Vian4g02301 296 Gene3D Hypothetical protein; domain 2 101 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02301 Vian-Chr4 39856930 39860301 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02301 K01246 - gmx:100801163 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02301 4 39856930 39860301 Vian4g02301 4 39856930 39860301 ECH