Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02299 ATGCTAGAGGCAATGGAAAGCTCAGTCAATGGTGGGTTCTCCCATTTGCAGAGCTGCGGAGACAGCAGCGAAGAGGAGTTATCGGTGCTGCCACGTCACACCAAAGTCGTGGTAACCGGAAATAACCGCACTAAATCGGTGCTCGTTGGTCTTCAAGGTGTTGTTAAGAAAGCCGTTGGTCTGGGAGGATGGCATTGGCTGGTTCTTACCAATGGTATTGAAGTGAAGTTACAAAGAAATGCCCTCAGTGTAATTGAAGCACCCACGGGTAATGAGGAAGATGATGAACTGGAATTTGAAAATATGCAGTGGAATGGATCTGATATGGCATCGGACGACACACAGAAGTCCCACAAACCGAGGCACAGAATGCATAGAACATTGGGATCATCTCATCACAAGACCATGAGTAGGTCCTTCTCTGGCGATTCACACTCAAAGGGGTCCGTTTCTATGCCTCATGGGTCCGCGAAGGTGGACTTGAGCAAACTTGAAATGGCTGCATTGTGGAGATATTGGCGACATTTTAATCTTGTGGATGCGGTCCCAAACCCATCAAAAGAGCAGCTAGTAGACATTGTTCAGAGGCATTTCATGTCACAGCAAATAGACGAGTTGCAAGTGATTATGGGATTTGTCCAAGCTGCAAAGAGGCTCAAGACAGTGTGCAAATAG 675 0.4711 MLEAMESSVNGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFENMQWNGSDMASDDTQKSHKPRHRMHRTLGSSHHKTMSRSFSGDSHSKGSVSMPHGSAKVDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDIVQRHFMSQQIDELQVIMGFVQAAKRLKTVCK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02299 224 Gene3D - 139 224 IPR038291 -
Vian4g02299 224 MobiDBLite consensus disorder prediction 107 155 - -
Vian4g02299 224 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 164 217 IPR025718 GO:0005515
Vian4g02299 224 MobiDBLite consensus disorder prediction 133 151 - -
Vian4g02299 224 PANTHER SAP30 21 221 IPR024145 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02299 Vian-Chr4 39829771 39832760 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02299 - - gmx:100809195 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02299 4 39829771 39832760 Vian4g02299 4 39829771 39832760 ECH