Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02275 ATGGGTGCAGAGTCACAAATTCCACGAAGCTTAATCCACAGAATCTACGCTCCCTTGGCTAACGAATTTCATTTTGCACCACCGGTCTCTTCATCCAGAACAAATGAACTCGAACTTGTTCGAGGTGTTCTACGAATCCTGCAAGGGTTTTCTGGTCCCCTGTTCTCTTGGGATAAAAGTGCAAACAGTTTCCGTGCAAAGAGCGGTGTTTACGTCAGCCATCTCTCACAGAAAAGTCTCCACTCTATTCTCAACCAGTTTATCCACGCCGCTACGTGTCTCCAATCCGTGGCGATTACACTCGATAAAATTGAATCTGCAGTGCCAAAGTCTCCCCCTACTCTGAACGCGTTCGCGTCCTCTGCTTCAGCGTGCCTTCAGCGGTTACGGAATCTTGCCTTGAAGGAGGAAACGTCCTCGAGCAATGCAGATGGAATAACCACTCCAACCTTGTTAGGATTGACCAATTCCTTATCGAGTCTTTGCTCAGGGGCTGAATTTCTATTTCAGGTAGTGCATGAGGCCATTCCTGCTGTATACTTTGAGTTTGGTGTCTCTGTACCAGCAGCAGAACTCACTGTTCACGTGCTTGACTATCTTCATAAGAAGCTTGATGAAATGTGTCTGGTACAAGGTGGTGAGGAGGAAGCTAACCAGATGATGCTTTATATGTATGTTGGAAGCTTGTTGCCGTATATTGAGGGTCTTGATTCCTGGCTTTTTGAAGGAATTCTTGATGATCCTTTTGGTGAGATGTTCTTTTTCACTAATAAAGAAGTCTCAGTTGATGAGGCTGAGTTCTGGGAGAAGAGTTATTTATTAAGAATACTACAGCATAGCAAGTTAAGTTCAGAATTCTCTTCCACAAATTATGGCAATGATTCAACCACAGCATCAGATGACAAGGAAATGGACAGGAGGGATTCCATCTCTTTGTCTGGTACAATCAAAGGAAAAGAACCAAGCATCAGAGACCGTCCAGCTTGTCCCTTTTTTATTAACGACTTAGCCAAATCAATAATTTCTGCTGGAAAATCTTTGCAGCTTATGCGCTATGTACCTAATTCCTCAGTGAATTGTAGCAAAGAAAGTAATTATGAGGTTGAAAGTGCCAAATGTTTAAACTATGGTTTATATCCTACTCAGAGAATGGCTGGGCTAACCTTGCCGGAAATTTTTTCTGTATCACTAGTTGGACTTCTTGGTCATGGTGACCATGTCTGTAAGTACTTTTGGCAAGAGAACTGGTACGATATTGTAACTGTTTCTTTGCATGCATCGTATGTAAATGAGGAAAAAATAGATAACGACAATAGTGAAAAATTAACTGCTCCACCTTATTCAGAGAAGACTTGGTATAAGTTCTTGATTGATACATTATTTCAGAAAAGATCAGCTGACTTAAAGCTAAAATATGAACACATAAATAATGACACATTAGAGCTGAGAGGGGCTAAAGTTATTGAAGATGAAGTGCTTCTCTTGGGGTCATACATGGAAAATCCAGTTATAACAGTATGTCGAGAAAATCTCGGAAAGAATGGGAATGCCTTGAAAGCATTGAATTTATCTCGAAAATTCAGCTTGCCTTCATTAAATGATGAGAGTTTAAGAAGAGCTATATTTGGTGCAGAAAGTACTGGATTTTCTGATAGTGAAGGAACAAACTATACTTTTGGCTTTCACTTTGGTGAATCTGAATACCTTCATTCACAGGATGACAGAAAGCTGTTAGAAATGTTATTTCCTTTTCCCACTATTTTACCTCCATTTCAGGATGAGGTTCCTGTGTCAGAGCTCTTACCTTTCCAGAAAAACAGCAGTCTTATTTCTAGAGTTCTTCGATGGATGCAAAGTGACCTAAGAACTACTCCGCTTCCTCTTGTTATTATGCAGTACTGTCTAACCGTCTACATTCAGAAACAGGTGGATTATATTGGAGTGAATATGCTGTTAAAGTTGATGAATGAATGGAGATTGATGGATGAGCTCGCAGTGTTGAGAGCTATATATTTGTTAGGTTCAGGTGATTTGCTGCAACACTTTTTGACCGTAATGTTCAATAAGTTAGACAAGGGCGAAGCATGGGATGATGATTTTGAATTAAACACAATATTGCAGGAGTCAATCAGAAATTCTTCTGATTGTATGCTGTTAAGTGCTCCAGATTCATTGGTAGTGACGATAACCAAAAATAGTGTTGACAATGATGAGCAAGCTAGTACAAGTGGTACTGCTTTGAACGCTCCTCGTCAAAGTCATGTCAATAGCTTTGGAATTAATGGCCTTGATATGCTCAAATTCACGTATAAGGTCCCTTGGCCTCTTGAACTCATTGCAAATACAGAGGCAATTAAGAAGTACAACCAGGTAATGCGGTTCTTGTTAAAGGTCAAGCGTGCAAAATTCGTATTAGATAAAGTGCGGAGATGGATGTGGAAGGGTAGGGGATCTGCTACAAACTACAGAAAGCATCATTGGTTAGTGGAGCAGAAACTCCTTCATTTTGTGGATGCTTTTCACCAATATGTGATGGATCGGGTATATCACAGTGCATGGCTTGAACTATGTGAGGGTATGGGTGCAGCAAAATCTCTGGATGAAGTCATTGAAGTCCATGAGACTTACATGTTATCAATTCAACGGCAATGCTTTGTGGTTCCTGATAAGCTGGGGGCTCTTATTGCTAGCCGCATCAACAGCATCCTTGGCTTAGCTTTAGACTTTTATAACATACAGCAGACATTAAGTGGTGGTGGAGCTGCTTCTGCCATCAAAGCAAGGTGTGAGATGGAAGTGGACCGGATAGAGAAACAGTTTGATGATTGCATTGCTTTCTTACTTCGGGTTTTATCATTCAAATTAAATGTGGGGCACTTCCCTCATCTGGCTGATTTGGTGACCAGAATCAACTACAACTATTTCTACATGTCTGCTAATGGAAATTTGATGACTTCCTCCAGTTCTGGAAGTGTTACTTCAAGGTTGGGGAAGCCTCCTGGGTAG 3006 0.4085 MGAESQIPRSLIHRIYAPLANEFHFAPPVSSSRTNELELVRGVLRILQGFSGPLFSWDKSANSFRAKSGVYVSHLSQKSLHSILNQFIHAATCLQSVAITLDKIESAVPKSPPTLNAFASSASACLQRLRNLALKEETSSSNADGITTPTLLGLTNSLSSLCSGAEFLFQVVHEAIPAVYFEFGVSVPAAELTVHVLDYLHKKLDEMCLVQGGEEEANQMMLYMYVGSLLPYIEGLDSWLFEGILDDPFGEMFFFTNKEVSVDEAEFWEKSYLLRILQHSKLSSEFSSTNYGNDSTTASDDKEMDRRDSISLSGTIKGKEPSIRDRPACPFFINDLAKSIISAGKSLQLMRYVPNSSVNCSKESNYEVESAKCLNYGLYPTQRMAGLTLPEIFSVSLVGLLGHGDHVCKYFWQENWYDIVTVSLHASYVNEEKIDNDNSEKLTAPPYSEKTWYKFLIDTLFQKRSADLKLKYEHINNDTLELRGAKVIEDEVLLLGSYMENPVITVCRENLGKNGNALKALNLSRKFSLPSLNDESLRRAIFGAESTGFSDSEGTNYTFGFHFGESEYLHSQDDRKLLEMLFPFPTILPPFQDEVPVSELLPFQKNSSLISRVLRWMQSDLRTTPLPLVIMQYCLTVYIQKQVDYIGVNMLLKLMNEWRLMDELAVLRAIYLLGSGDLLQHFLTVMFNKLDKGEAWDDDFELNTILQESIRNSSDCMLLSAPDSLVVTITKNSVDNDEQASTSGTALNAPRQSHVNSFGINGLDMLKFTYKVPWPLELIANTEAIKKYNQVMRFLLKVKRAKFVLDKVRRWMWKGRGSATNYRKHHWLVEQKLLHFVDAFHQYVMDRVYHSAWLELCEGMGAAKSLDEVIEVHETYMLSIQRQCFVVPDKLGALIASRINSILGLALDFYNIQQTLSGGGAASAIKARCEMEVDRIEKQFDDCIAFLLRVLSFKLNVGHFPHLADLVTRINYNYFYMSANGNLMTSSSSGSVTSRLGKPPG 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02275 1001 Pfam Gamma tubulin complex component N-terminal 40 366 IPR041470 -
Vian4g02275 1001 Gene3D - 660 975 IPR042241 -
Vian4g02275 1001 FunFam Gamma-tubulin complex component 660 975 - -
Vian4g02275 1001 MobiDBLite consensus disorder prediction 285 305 - -
Vian4g02275 1001 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 31 976 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Vian4g02275 1001 Pfam Gamma tubulin complex component C-terminal 660 976 IPR040457 GO:0043015
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02275 2 707 Glycosyltransferase AT1G20570 48.966 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02275 K16572 - gmx:100782299 1785.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02275 4 39588165 39597834 Vian4g02275 4 39588165 39597834 ECH