Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02257 ATGCAAACGGTGGGGAGAATACTGAGTCAGGGCGTGTATACGGTTTCGGGGCCGTTTCATCCGTTCGGAGGCGCCGTCGATATTGTGGTGGTGGAACAGAAAGATGGCAGTTTCAAGTCGTCGCCCTGGTACGTTCGATTCGGCAAATTCCAGGGGGTTTTGAAGTCGAGGGAAAAGGTGGTGGATATCTCTGTCAACGGGGTGCTTGCTGGTTTCCAAATGCATCTCGATAATAAGGGGGAAGCTTACTTTCTCAGGGAAGTCGTTGCACAAGAAGAAGACAATTTGATGTTTCCGCCTTCTTCTGGCGATGATAAAGACGAACACTCTCGCAGGTCCAAGAGTTGCGATTATGATGGAGAGGGTGCGGTAAAGAGTAATTCTCGCCGTTCAAGAATACTTGGCTTTGTTTTTGGGAGAAGGTCTTTGAAGCAAAGAGATGGTAATGGTGAAGCGATTGGGAACAGGGTGGGTTCGTTGGAGCGTGCAGAGATTGCAGCTAACTTGTTAGACCTCAAGTGGTCCACTAATCTCTCCGGGGAACAAGGGCAAAAGGTTCTTGCTAACTCGTCTGGGGATGCTAATGTGGTCGTGGACGATGCTGAGTTGAAAGAGGAAGCTTGTTTTGGTCGTGAGTGTGACTTGAATGGGAAGGAAGTAGTGTATGATATTGCAGAGTCTGACGTGCAGGTTGCGTGCGTGAAGGTGAAGCTTGTGGAAAAGGAGTTGAATGGAGAAGAAGTTTCTGGGGTGAGCGCTGTTGATGCATGTGATAATAGTAATGATATTTCCAAAAACGATGTTTCGGCTGATGGGGTTTGCCGTGAAACACCAGAGACCTCCAAGTTGGGCGTGTCGTGCTCTAGTGAACAAGCTGAAGAGGTGATGTACCTTGATGGCGCAGCAGAATGTGAAGAAGTCCACGTCCATGTCCATGATGAAGTCTTGCATCGTGCCACTGTACTGCTATCTGAGGGTACAGAAGCTGTGGAAGTTATTGAGGAGGCCGATCTTGGGATGCCAGTACTGGGGATCTCTGAGTTCCATTCTGGGGTTCAGCAAATAGATTGTTTGGATTCTGGTGATATTATATATAATGATGTGGATATTGAAGAGCAATCAATATCTACAACACCTCAAACTGTCAAAATTAGCCTAGGACATTTTTCAGGTGAGAAAGTTGAGCCCAATTATGTTATCAAACCTTCCAGCTACAGCATTCTGGATTACCAAGCCATAAGCGAGAATATGAAGGACAAGGACTTCTCCAGCACATTATCGACTCCTATGGACCCTGTTGATAATTGTTTACCTAGAAAAGCATCAAGGAGATCACCATCACTAAGTTCAGAGGATGAAAGATTCCTTTTCAGTGACCTTGATGAAAGTGAAATCAATGATCGACCCGAGAGAACACCCTTCCCTGAACATTTAGATAAAGAATATCATGTTTCTTATGAGAATGACACTGGAAAGTTAACAGCAATATCCTGTCCCATAGTCATTCCTAGAAATGAAGCTGCTGGAGAGAAAGTTGGGCATCATTCGGGATCCTTGCCAAACTTTTCTTCTAGAATTGACATTATGAATCAACATGATGTCCGTTACCCTTTAAGTCAATCACTGCAATCAAGATCAAAATCCTTGCCATGTGCATTTCCTCCAAAAGATGGTTTAGAATGTCTAAAACCTGATGAAGACAAAGGAAACAACCTAACACACGAGGAGTCAGGTAACAAGGATTATCATCATTCTGGGGAAATCAAAGATACAACTCCGAAGCTTCCCCTTGGAGATGATCCATCAACACAGAACCCTTCCCCTGCTGGAAACTGGAGACTTTGGCCTTTCTCCTTGAGGAGAGCAGAATCTAAAGATTCTATATTGCCGCCGTTTCTAAGTGATGCCAAAAACACTACTGATGGTAATTCTCTAGAGAATACGACTAGCACAGTTATGAACAAAGATAAACCCGAACCCAAAGCAGGATCTAAAGATTCTATATTGCCGCCTTCTTTAAGTGATGCCAAAAACACTACTGATGGTAATTCCCTAGAGAGTACGATTAGCACCGTTATGAACAAAGATAAAACCAAACCCAATTTTAAAAAAATAAAGGTTAGGGAAACAACTCCAACTTCTGAACAGGTAGCCTCCTTGAATCTGAAGGATGGGATGAATACTGTAACCTTCACTTTCTCTACAGCCGTGCTGGGGAATCAGCAGGTCGATGCTCGAATATATCTGTGGAAATGGAACACTCGCATAGTGATCTCTGATGTGGATGGTACAATTACAAGGTCGGATGTTCTTGGTCAGTTCATGCCTTTGGTTGGTATTGACTGGTCACAGACAGGGGTTGCACATTTATACTCCGCTATTAAGGAGAATGGTTACCAACTTCTTTTTCTTAGTGCTCGTTCAATTTCTCAGGCCTATCTTACACGACAATTCCTAGTTAATCTTAAACAGGATGGAAAAGTTTTACCCGATGGTCCTGTTGTTATTTCTCCTGATGGACTTTTTCCTTCTCTATATCGGGAAGTTATTAGGAGGGTTCCCCACGAATTCAAAATTGCATGCTTAGAGGTCATCAAGGATCTTTTTCCTTCTGATTGCAATCCTTTCTATGCTGGTTTTGGTAATAGGGATACGGATGAAATCAGCTACCTTAAGGTTGGAATTCCCTTGGGAAAAATCTTCATAATTAATCCCAGGGGAGAGGTTGTTGTAAACCGTCGCGTTGACTCAAAATCATATGCTTCTCTGCATGCTCTCGTGAATGGGATATTCCCCCCTACGAACTCCAATGAACAGGAGGACTTTAACTCTTGGAATTTTTGGAAACTACCACCTCCTGCTATAGATATTTGA 2874 0.4353 MQTVGRILSQGVYTVSGPFHPFGGAVDIVVVEQKDGSFKSSPWYVRFGKFQGVLKSREKVVDISVNGVLAGFQMHLDNKGEAYFLREVVAQEEDNLMFPPSSGDDKDEHSRRSKSCDYDGEGAVKSNSRRSRILGFVFGRRSLKQRDGNGEAIGNRVGSLERAEIAANLLDLKWSTNLSGEQGQKVLANSSGDANVVVDDAELKEEACFGRECDLNGKEVVYDIAESDVQVACVKVKLVEKELNGEEVSGVSAVDACDNSNDISKNDVSADGVCRETPETSKLGVSCSSEQAEEVMYLDGAAECEEVHVHVHDEVLHRATVLLSEGTEAVEVIEEADLGMPVLGISEFHSGVQQIDCLDSGDIIYNDVDIEEQSISTTPQTVKISLGHFSGEKVEPNYVIKPSSYSILDYQAISENMKDKDFSSTLSTPMDPVDNCLPRKASRRSPSLSSEDERFLFSDLDESEINDRPERTPFPEHLDKEYHVSYENDTGKLTAISCPIVIPRNEAAGEKVGHHSGSLPNFSSRIDIMNQHDVRYPLSQSLQSRSKSLPCAFPPKDGLECLKPDEDKGNNLTHEESGNKDYHHSGEIKDTTPKLPLGDDPSTQNPSPAGNWRLWPFSLRRAESKDSILPPFLSDAKNTTDGNSLENTTSTVMNKDKPEPKAGSKDSILPPSLSDAKNTTDGNSLESTISTVMNKDKTKPNFKKIKVRETTPTSEQVASLNLKDGMNTVTFTFSTAVLGNQQVDARIYLWKWNTRIVISDVDGTITRSDVLGQFMPLVGIDWSQTGVAHLYSAIKENGYQLLFLSARSISQAYLTRQFLVNLKQDGKVLPDGPVVISPDGLFPSLYREVIRRVPHEFKIACLEVIKDLFPSDCNPFYAGFGNRDTDEISYLKVGIPLGKIFIINPRGEVVVNRRVDSKSYASLHALVNGIFPPTNSNEQEDFNSWNFWKLPPPAIDI 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02257 957 SUPERFAMILY HAD-like 748 900 IPR036412 -
Vian4g02257 957 MobiDBLite consensus disorder prediction 96 124 - -
Vian4g02257 957 MobiDBLite consensus disorder prediction 99 124 - -
Vian4g02257 957 PANTHER LIPIN 1 956 IPR026058 -
Vian4g02257 957 MobiDBLite consensus disorder prediction 633 655 - -
Vian4g02257 957 MobiDBLite consensus disorder prediction 630 685 - -
Vian4g02257 957 MobiDBLite consensus disorder prediction 560 594 - -
Vian4g02257 957 MobiDBLite consensus disorder prediction 560 612 - -
Vian4g02257 957 MobiDBLite consensus disorder prediction 671 685 - -
Vian4g02257 957 MobiDBLite consensus disorder prediction 421 452 - -
Vian4g02257 957 Pfam LNS2 (Lipin/Ned1/Smp2) 710 932 IPR013209 -
Vian4g02257 957 SMART lns2 756 912 IPR031315 -
Vian4g02257 957 MobiDBLite consensus disorder prediction 597 611 - -
Vian4g02257 957 Pfam lipin, N-terminal conserved region 1 93 IPR007651 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02257 Vian-Chr4 39446571 39452913 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02257 K15728 - gmx:100811824 1263.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02257 4 39446571 39452913 Vian4g02257 4 39446571 39452913 ECH
Vian7g00735 7 15593476 15597491 Vian4g02257 4 39446571 39452913 PCT