Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02252 ATGGGATCCTCACACAGCCGCGAAGATCTGTTAGATTCATCCGATTCGGAGCAGGAGGAGGAGGAAACCTACCAAGACGCCCATGGAGGAAGCTCCGAACGGCCACCAAAAACGCTGTCAACTTCATCCCTTGATGACGTGGAGGCCAAGCTCAAAGCCCTCAAACTCAAATATTCCTCCTCCAGCACCCCCGCTGTTAAAAACGCCGTCAAACTCTACCTCCACGTCGGCGGCAACACCCCCAAAGCCAAGTGGGTAATCTCCGACAAACTCACCACCTATTCTTTCGTCAAAACTCACTCCAACGCCGACACCGACGACGAAAACGACGATACGGACGATGACGAAAGCAACAGAGAACAACCATTCTGGGTTATGAAAGTCGGTTCCAAAATCCGGGCAAAGGTGGACCCCGAGATGGGCCTGAAGAGTTTCCCCGATCAGCGGCGTGTGGACTTCGTGGCGCGCGGCGTCTGGGCGATGAAGTTCTTCACCGTGCAAGACCAAATCGACTTCATTGATTCCTTCCAGAACTGTCTCTTCGAGAACACGCACGGGGTCGAGGCGACGGAAGCAAATAAGCTCAAGATCTACGGCAAGGATTTCATGGTGTGGGCGAAACCCGAGGCCGCGGACGATTCTATGTGGGAAGACGCAGAAGAAACTTTCTCCAAAAGCTCCACTCCGGTTAGGGCAAATCAGGATTTGAAAGAAGAGTTCGAAGAAGCTTCAAACGGCGGCATTCAGAGTATTGCATTGGGTGCTTTAGATAACAGTTTTTTGGTGAGTGATAACGGGATTCAGGTTGTGAAGAACTTCGCACACGGGATTCACGGGAAGGGTGCTTTCGTGAATTTCAGTGATGGGTATAAAAATGGGGGTGGGGATTCTTCTTCCTATTCTACCCCTAAGAAGACGCTTCTTATGAAGGCTGAGACGAACATGCTTCTGATGAGTCCAATGGGTGGCGGAAAGCTTCACTCCACGGGGATTCATCAGCTTGATATTGAGACCGGGAAGGTGGTCAGTGAATGGATGTTTGGGAAGGACGGTACAGAGATTACAATGAGGGATATTACGAATGATTGTAAAGGAGCACAGTTGGATCCGTCTGGGTCAACATTTCTGGGGTTGGATGATAACAGACTTTGTAGGTGGGATATGAGGGATCGCAATGGGATGGTTCAGAACTTGGCTGATTCGAATGCCCCTGTGTTGAATTGGGCGCAGGGACATCAGTTTTCGAGGGGGACTAATTTTCAGTGCTTTGCCACTACCGGTGATGGGTCCATTGTTGTAGGGTCTTTGGATGGAAAGATAAGACTGTATTCGGTGAACACGATGAGGCAGGCGAAGACTGCGTTTCCTGGCCTTGGATCTCCCGTCACTCATGTGGATGTTACCTTTGATGGCAAGTGGATCGTGGGTACTACTGATACATACTTGATTCTTATTTGTACCCTCTTTACTGACAAAGATGGAAGGACGAAGACTGGTTTTTCTGGGAGGATGGGGAACAAGATTGCTGCTCCCAGGTTGTTGAAGCTCACCCCTCTTGATTCCCATTTGGCCGGAGCGAATAACAAGTTCCGGAATGCACAGTTTTCGTGGGTGACAGAGAATGGGAAGCAGGAGCGGCATATAGTAGCCACTGTGGGGAAGTTCAGTGTGATATGGAACTTCCAGCAAGTCAAGGATGGTTCTCATGAGTGCTATCGTAACCAGCAGGGTCTTAAGAGCTGCTACTGCTACAAGATAGTCCTTAGGGATGATTCCATTGTTGAGAGCCGTTTTATGCATGACAGATTTGCAGTCAGCGATTCTCCTGAAGCGCCACTGGTCATAGCAACACCAATGAAAGTTAGCTCTTTCAGCATATCTGGCAAGCGATGA 1893 0.496 MGSSHSREDLLDSSDSEQEEEETYQDAHGGSSERPPKTLSTSSLDDVEAKLKALKLKYSSSSTPAVKNAVKLYLHVGGNTPKAKWVISDKLTTYSFVKTHSNADTDDENDDTDDDESNREQPFWVMKVGSKIRAKVDPEMGLKSFPDQRRVDFVARGVWAMKFFTVQDQIDFIDSFQNCLFENTHGVEATEANKLKIYGKDFMVWAKPEAADDSMWEDAEETFSKSSTPVRANQDLKEEFEEASNGGIQSIALGALDNSFLVSDNGIQVVKNFAHGIHGKGAFVNFSDGYKNGGGDSSSYSTPKKTLLMKAETNMLLMSPMGGGKLHSTGIHQLDIETGKVVSEWMFGKDGTEITMRDITNDCKGAQLDPSGSTFLGLDDNRLCRWDMRDRNGMVQNLADSNAPVLNWAQGHQFSRGTNFQCFATTGDGSIVVGSLDGKIRLYSVNTMRQAKTAFPGLGSPVTHVDVTFDGKWIVGTTDTYLILICTLFTDKDGRTKTGFSGRMGNKIAAPRLLKLTPLDSHLAGANNKFRNAQFSWVTENGKQERHIVATVGKFSVIWNFQQVKDGSHECYRNQQGLKSCYCYKIVLRDDSIVESRFMHDRFAVSDSPEAPLVIATPMKVSSFSISGKR 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02252 630 FunFam Vacuolar import/degradation Vid27-related protein 313 602 - -
Vian4g02252 630 Pfam VID27 C-terminal WD40-like domain 256 573 IPR013863 -
Vian4g02252 630 SUPERFAMILY Putative isomerase YbhE 247 528 - -
Vian4g02252 630 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 27 1 628 IPR040458 -
Vian4g02252 630 MobiDBLite consensus disorder prediction 101 120 - -
Vian4g02252 630 MobiDBLite consensus disorder prediction 1 44 - -
Vian4g02252 630 Gene3D - 244 550 IPR015943 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02252 1 630 Acyl Lipid Metabolism Gene Families AT3G19240 64.516 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02252 - - gmx:100810233 1104.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02252 4 39411415 39414465 Vian4g02252 4 39411415 39414465 ECH