Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02248 ATGGCTTTGCCTTCTTTACTACCCAAAACGGCACCGCATCTTCTTCCCCTCACAAACCCCTTCTCTTCCTCTTCCTCTCCCTCTACTCTCATCTTACCTTTCCGCTTCCACTTTTTCTCTCACCTTCCTCCTCTCTCTCTCCTCAAAGCCGCTTCCTCCGCCGGCGATAGTTTGCGCAGCAAGCCCCTCATGTCCCAGAGAAGGGGGATTTTGGAGGAACACGGCAGCCAAGCCTTTGAGGAAGACGACGACGACAAATGGATTGACTGGGAGGACCAGATTTTGGAGGACACCGTTCCTCTCGTTGGTTTCGTCAGGATGATTCTCCATTCTGGACAATATGAAAGTGGAGATAGACTAAGTGAAGAGCATGAGAAAACCATTATTGAGAAGCTGCTTCCCTTTCATCCAGAATTTGAGCAAAAGATCGGATGTGGAGTTGATTATATCACGATTGGATATCATCCTGATTTTGAACGCTCAAGGTGTTTGTTCATTGTTCGACAAGATGGTCAAGTGGTTGATTTTTCATATTGGAAATGTATAAAGGGCTTGATCAGAAAGAACTATCCTTTATATGCAGACACTTTCATTCTCAGACATTTCAGGAAGAAAAGTCGTAATTTGTGA 630 0.4508 MALPSLLPKTAPHLLPLTNPFSSSSSPSTLILPFRFHFFSHLPPLSLLKAASSAGDSLRSKPLMSQRRGILEEHGSQAFEEDDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITIGYHPDFERSRCLFIVRQDGQVVDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRNL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02248 209 Gene3D - 95 185 - -
Vian4g02248 209 FunFam Protein DCL, chloroplastic 96 188 - -
Vian4g02248 209 Pfam Protein of unknown function (DUF3223) 107 182 - -
Vian4g02248 209 PANTHER PROTEIN EMBRYO DEFECTIVE 514 73 205 IPR044673 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02248 Vian-Chr4 39386766 39390757 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02248 - - gmx:100306718 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02248 4 39386766 39390757 Vian4g02248 4 39386766 39390757 ECH