Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02226 ATGGCTGCTCCTCTTATTTTCAGACAGGCTCTCCTCCTTCGAGTTTGTTTCCATAACTACCAAAGCTTCACCGCCGGGGCTGTCGCGGCGCGTCACAGGCCGTTGTGCAGCGCCACCGCCAACTTATCGTCGGACGAAGCCGGCGAGAAAACAAAATCTAGCGGCATTAGCAACAACTCCTTTGTGCGGAAAGCTCAGTTCCCGTCAAGTCAGTCGCGGTGGGAAGATGACCCTGACTACCGGAAGTGGAAGGACAAAAAAGAGGAGATTCTGAAGGACATCGAGCCTATCATTATGCTCGCCAAGGACATTCTCCACTCCGGAAGGTACATGGACGGAGAGCGATTGAATATGGAGGACGAGAAAGCGGTTGTTGAGAAGCTTCTTGCGTACCATCCACAATCTGAAGATAAGGTTGGATGCGGCCTTGAATCTATTATGGTTGACCGCCATCCCCAATATCGACAGTCAAGGTGTCTTTTTATTGTAAGAACTGATGGTGGCTGGGTTGATTTCTCCTATCAAAAGTGCCTTCGGGAATACATTAGAGATAAGTACCCTACTCATGCGGAAAGGTTTATTCGAAGACATTTTAAACGTGGCAGTGGTTGA 612 0.4918 MAAPLIFRQALLLRVCFHNYQSFTAGAVAARHRPLCSATANLSSDEAGEKTKSSGISNNSFVRKAQFPSSQSRWEDDPDYRKWKDKKEEILKDIEPIIMLAKDILHSGRYMDGERLNMEDEKAVVEKLLAYHPQSEDKVGCGLESIMVDRHPQYRQSRCLFIVRTDGGWVDFSYQKCLREYIRDKYPTHAERFIRRHFKRGSG 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02226 203 PANTHER PROTEIN EMBRYO DEFECTIVE 514 47 201 IPR044673 -
Vian4g02226 203 Pfam Protein of unknown function (DUF3223) 102 178 - -
Vian4g02226 203 Gene3D - 87 185 - -
Vian4g02226 203 FunFam Protein DCL, chloroplastic 92 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02226 Vian-Chr4 39074338 39079845 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02226 - - gmx:100818770 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02226 4 39074338 39079845 Vian4g02226 4 39074338 39079845 ECH
Vian7g00694 7 15131990 15137499 Vian4g02226 4 39074338 39079845 PCT