Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02218 ATGAAGCGCCCACTTTCGTCAACCTCCGCCCATCATGACGACACCAAGACGAAGAAGGCCAAGGCGGTGATGATAGAGGATGGAGAAGAAGAGGAAATGGAACCCATGGAGGTGGAGGGATTAGGGCGCTTCGACGACAACCTGCTGTTTGAGGTTTTGAAGCACGTGAACGCGCGTACCCTAGCTATGGCAGGGTGTGTCAATAAGCAGTGGCACAAGACTGCACAGGACGAGAGGCTGTGGGAACTGATCTGCACTAAGCAGTGGGCGAACACTGGATGTGGAGAGCAACAGCTACGATCGGTGGTTCTCGCCCTCGGTGGCTTCCGTCGCCTCCACGCGCTTTATCTCTTTCCTCTTTCCAAACCTCATACATCTTCTTCGTCATCCTCTTCATCGTCCTCCTCCTCTCCCTGGGGTCCCACCATCTCCCAAGTCACTCGATCGAAACCCTTACGTTTGGGGAAGGACGAGGTTCACCTCTCTCTTTCGCTTCTCTCCATTCGCTACTACGAGAAGATGAATTTCAATAACCGAACCAGATGA 546 0.533 MKRPLSSTSAHHDDTKTKKAKAVMIEDGEEEEMEPMEVEGLGRFDDNLLFEVLKHVNARTLAMAGCVNKQWHKTAQDERLWELICTKQWANTGCGEQQLRSVVLALGGFRRLHALYLFPLSKPHTSSSSSSSSSSSSPWGPTISQVTRSKPLRLGKDEVHLSLSLLSIRYYEKMNFNNRTR 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02218 181 Gene3D - 31 147 - -
Vian4g02218 181 MobiDBLite consensus disorder prediction 1 20 - -
Vian4g02218 181 FunFam F-box protein GID2 29 140 - -
Vian4g02218 181 CDD F-box_AtGID2-like 43 85 - -
Vian4g02218 181 SUPERFAMILY F-box domain 38 90 IPR036047 GO:0005515
Vian4g02218 181 PANTHER F-BOX PROTEIN SNE 44 177 IPR044184 GO:0009937|GO:0019005
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02218 Vian-Chr4 38957362 38957907 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02218 K14495 - gmx:100527591 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02218 4 38957362 38957907 Vian4g02218 4 38957362 38957907 ECH