Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02204 ATGAAGTCCCAAATGAACAAAGAGAGAGTAACCCCTATTCCCAATACTCCTTGCAACGCCAGCGATCATATTTGCATCGACCCGGGTTGCTTCTTCTGCAGCATGGGAGAAGCAGATGCATCTCTCAGAAGGGCTGGAATAACGACCTGCTTCAAAGAATTATTTCAGGGAGAGAATCATGAACAGCACGTGCTGGTGCTGAGTGGACTGTGGCACATTGCAATGACCCAACCCAGCGACCCAGAGTTCCCATCCTTCGGAATATTCAAATGCATGGCAAGTCTAATTCACAAAGGGATAAACGACAGCCACTGGCTTCTCACAAATCAAAACATATACATACCCTATTACGCTGCTCACATCATTGGCTCTTACACGATGAACAAGGAGGAGTTTGCACAACTGGCCGTGCAATCAGGTGTGATACCGCCATTGCTAGACCTGCTCAGGGGGAAGATCAGTTGGGTTGAGCAAAGAGTTGCTGTTAGAGCACTTGGTCACTTGGCCAGTTACAAAAGCACGTTTGAATCAGTAGTACTGCACGAGCAAGAGGTAGTGAAGTTGGCCTTGAACTTGGCTTCCACTTGTTTAGAAGTGGTCTATGTTGACTTCGTAGCTGTGAAGGAAAACAAAAGGCTGGAGTATCACAGAAACTTGCTCACTAGAGGGGTTGGGGATTTGGAGATGGAGAATCGCAAGGCAGAGGAATGGGCTAGCCAGCTTCAGTGTTGGTCTCTTTATCTTCTGAATTGCTTTGCTTGCAAAGATAGGGCTCTGGATCTCATATGCAAGAAGGGGTTTCTCAAGGACTTGTGTGATATGTGGGGAGGGATGATAAATCACACGTCACCAGCAGGGGTTGGACTGATACGAATCTTGTGTTATAGTAAAGAAGGAAGGAAAAACATTGCTCAGTTACCCAAAGTTGTGAATGCTCTAGGTAACCTTTCAAGATCTTCAGATGATTGGCAGTATATAGGTATCGATTGTCTCCTTCTCCTTCTCAAGGATCCAGATACGAGGTACAAAGTTCTTGATGTTGCCGTCCCTTACCTGACTGATTTGATTGAACTTAAAAACCTTGGAGATAAATCAAACGTGGGCGAGACCATCACAAAGGTTCTTCTGAATTTGAAACCTAACAGACAAAAGGTTGGAGCAGTATTGCAAGAAGTGATGGATTTGAAAGTGGATAGGAGGGACCAGGAGAAGGTACTCTCGGAGGAAAACTTGGAGGAAACAAAGGCTTTGGTGAGTTTGATAAAACAACAAGCGAATCACAAGTTCAGGTTGGGAAAGATTGAAGAAGCTTTGGTGAAATACTCCGAAGCGCTCGGTGTTTGTCCCTTGAGGTTTAGGAAAGAGAGAATGGTGATTTATAGTAACAAAGCTCAGTGTCATATTTTACTGAAGGACGCAGATTCAGCTATCAGTGACTCAACGCGCGCTCTTTGCCTATCCAGCCCTGCAAACAGCCATATGAAAAGCCTTTGGAGAAGATCACAGGCATATGACATGAAAGGAATGGCGAAAGAGTGTCTCATGGACTGCATAATGTTCATGAACAGTAGCATCAAGTCGGGTGGTGAGACCATGGGTGTCAAGATCCCATACCACCCTGCGCGCCTGATCTGCAAGCACATGGATGCCACGTGGCTCTTTGCCACTGCTCGCTCCAGGCTAGAAAAAACAATGCAAGAATTGAACCAAGTTGGCGGGCATGATCAGAACCAAAAGCAACCATGTGATCATAATAAGACCATGATGACGATGATAGAAAATACAAACAGTCACATGCACGGTCTGTCAACCATTATTGAAGAACCTTTTCACGCGAAAGAAGGTGGTGGTAGGAGAAAGATGGAAAGGGCGAGAAGAAGATTCAAGAAAGGTGCTGCGGCCGGAGCAACGTAG 1914 0.4561 MKSQMNKERVTPIPNTPCNASDHICIDPGCFFCSMGEADASLRRAGITTCFKELFQGENHEQHVLVLSGLWHIAMTQPSDPEFPSFGIFKCMASLIHKGINDSHWLLTNQNIYIPYYAAHIIGSYTMNKEEFAQLAVQSGVIPPLLDLLRGKISWVEQRVAVRALGHLASYKSTFESVVLHEQEVVKLALNLASTCLEVVYVDFVAVKENKRLEYHRNLLTRGVGDLEMENRKAEEWASQLQCWSLYLLNCFACKDRALDLICKKGFLKDLCDMWGGMINHTSPAGVGLIRILCYSKEGRKNIAQLPKVVNALGNLSRSSDDWQYIGIDCLLLLLKDPDTRYKVLDVAVPYLTDLIELKNLGDKSNVGETITKVLLNLKPNRQKVGAVLQEVMDLKVDRRDQEKVLSEENLEETKALVSLIKQQANHKFRLGKIEEALVKYSEALGVCPLRFRKERMVIYSNKAQCHILLKDADSAISDSTRALCLSSPANSHMKSLWRRSQAYDMKGMAKECLMDCIMFMNSSIKSGGETMGVKIPYHPARLICKHMDATWLFATARSRLEKTMQELNQVGGHDQNQKQPCDHNKTMMTMIENTNSHMHGLSTIIEEPFHAKEGGGRRKMERARRRFKKGAAAGAT 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02204 637 MobiDBLite consensus disorder prediction 613 637 - -
Vian4g02204 637 Gene3D Tetratricopeptide repeat domain 383 526 IPR011990 GO:0005515
Vian4g02204 637 SMART arm_5 129 170 IPR000225 GO:0005515
Vian4g02204 637 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 22 608 - -
Vian4g02204 637 SUPERFAMILY ARM repeat 106 393 IPR016024 -
Vian4g02204 637 Gene3D - 106 381 IPR011989 -
Vian4g02204 637 SUPERFAMILY TPR-like 411 517 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02204 Vian-Chr4 38813091 38815810 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02204 - - gmx:100777591 1022.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02204 4 38813091 38815810 Vian4g02204 4 38813091 38815810 ECH