Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02201 ATGGCGTCCAGTTTTGATCGATGGGAAAAAGATCCTTTCTTTAGTGCTGCCGAAGAAGTTCAGGAATCTTCTGACCGGATGGAATCTATCTATAGAACATGGATTCACGCAATGAAGGATGCATCCAGCCTGTGGAACTGCGATGAAGCCCGCCGAGATCTACAAACTGCCATTGGCACTGCTAAATGGCAGTTAGAGGAATTTGAACGGGCTACTCGGTCAAGTTATAGCAAAGTTTCAACTGAGGATGCGAGAAATAGACACCGAGATTTTGTTGATGCCATCCGTGACAAGATCAGCAATGTTGAACATTTGTTACTAGAACCTGTTCATTCAGGTAGCAAGGCTTCTCTGCCTTGGCCACGTCTGGATGAAGGAGAGCGTGATGAACTCGCATCATTTCTTTCGGGAACATCGGCTGCTGTTTGCAAAATTCCTGTGAAATGTGCCAGCAGAGATGGTGAAAATGTGCAGTTAAGTGACAAAGATTCTATCCCTAATTGTTCAAGCAATTTACATGTTTCATCTGGGTGGGTTTCGTCTGATGCAGCACAAGAAAAGTCACTTGGGCATCGCAGGGCAGCTAGTGCTGATCCTGACATTGGTTCTTGGCAAATCACTGTTTCTGATGGTGTGCAAGAATCAAATTCCTCCAATGGTTCTTCCAGTCTAAATCCTGTACACAAGGTAGCAAGTCTCTCTGGATTTTTTGGTTCCGTGGAAACTATCTCTAAGTTGAAGTGGCCGAAGAATGGTTATAGAAAGCTGAAACCAGTGAATCATTGTGAAGAAACGGATAATGCACTATTACCATCAGCTGGATTGAATGGGGGCAACAATGCATACTATGAAAAAAGTAAGACTTGCCTTGATAATTATGACGAATCTTATGATAAGCAACTCCACGGGTGGTACGGGGCTTTGCAAAGGCAGCTTCAAAGATCTCAATACCAAATGCAATACAATCGGCATGTTCAAATAACTATCTGGGCTGTTATTCTCCTTTGCTTGATTGTTTTTATTGCTTTTTGCACGATGTAG 1041 0.4313 MASSFDRWEKDPFFSAAEEVQESSDRMESIYRTWIHAMKDASSLWNCDEARRDLQTAIGTAKWQLEEFERATRSSYSKVSTEDARNRHRDFVDAIRDKISNVEHLLLEPVHSGSKASLPWPRLDEGERDELASFLSGTSAAVCKIPVKCASRDGENVQLSDKDSIPNCSSNLHVSSGWVSSDAAQEKSLGHRRAASADPDIGSWQITVSDGVQESNSSNGSSSLNPVHKVASLSGFFGSVETISKLKWPKNGYRKLKPVNHCEETDNALLPSAGLNGGNNAYYEKSKTCLDNYDESYDKQLHGWYGALQRQLQRSQYQMQYNRHVQITIWAVILLCLIVFIAFCTM 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02201 346 Gene3D - 9 107 - -
Vian4g02201 346 FunFam Syntaxin 10 8 109 - -
Vian4g02201 346 CDD SNARE_NTD_STX6-like 11 103 - -
Vian4g02201 346 SUPERFAMILY t-snare proteins 10 104 IPR010989 GO:0016020|GO:0016192
Vian4g02201 346 Pfam Syntaxin 6, N-terminal 11 103 IPR015260 GO:0016020|GO:0048193
Vian4g02201 346 PANTHER OS05G0443700 PROTEIN 1 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02201 Vian-Chr4 38791215 38793824 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02201 - - vum:124843176 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02201 4 38791215 38793824 Vian4g02201 4 38791215 38793824 ECH