Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02195 ATGTCGAATAGATCCGATCAGGGTAGACAAGACAACAATAACAAAGGTTTCACCAAAACCCATAACCACAACAACTTTCTCCCCAAAAATCCCAATCCAACCCTCTCAACTTCTCTCAGACAAACCCAACCATCCATCCCCGCCACCACTAGCGGAGTCCCAAACAGAGGCCAGAATGGTAATTTCGTTAAATACTTACCACAAGACGAGGCCGTGGCGGCGGGTCTTGGCGCCGAAGATGGAGCATTGGATCCCCTCGAATCTCAGAGAGTCGTAGATCTTTTGAACACACACTTGTCACGCTTGCTCAAGTGCAAACCTAAGCAATTCTGGACGCAAGTGGCTGCTGACGCCTCCCTACATGAGTTTTTGGACAGCTTCTTGCAATTTAGAAACAGGTGGTATGATTTCCCTCATCGCGGGGTGAAAGGGATTGTAGCAGGTGTTATTGTTGGCGAGAGGGATTTGAGTCGCCGCGTTTTCATGGTATTGTATCGCATTTCTTCGAATAAAGACCCTGGTGCTCGACCGGCCGATGCCCTCAGTTTGAGAGACCATGGAGTTCTTTTGCAGGAGAAAAAGTTGCTTGAATTGCCAAAGTTATTGGATATATGTGCCATATACTATCATGAAAATGAAGAATTAACAAGATCACTGGTCAGAAATGCCTTCAGTGCTCAACCTTGGCTCCATAATAATCTGACTGCAGTAATATCCCATTTTCTAGGAATTGTCAGCACAATGCATGAACGTTGCAGTTCATCATTGGAGGTTTTATTTTCTTCTGGAAATCTCGATGACCACAATGCTGCTTTTCTTCAAGCTGATCTGCTGGAGGTGATGGACTTTATAAATGATGCAATTGTATCAATGGATTCTTTTGTTAGTGCATACGAACCAGCAGCTGTATTCTTTTCTTGTCCAGTTGAAATGAGTTATGGGAATGAGGAACTGCTGAGCCTCCTTGCCAGATTGCATGATTCACTAATTCCATCATTACAAAAGGGGTTCCGTTTGATTTTTTCTGACAAACATGATGGCACAACATCTAATATTTTGGTGAGTCTGAAGATGTTAAAAATAAGACTGGTAAAGTTTGGTTGGCAACTATTGCACTTGTGCTATCTAAGTGATGAAGTGTTCAGAGATGGCATCCCTCTTCCAGCTGCCACTAAGATGTTTCCTGCCAATGTAGAGGACCCAGTCATCAGAGCAGATATTCTTGTTCAAACAATTCGAGATATCAATACAGTATCATCACATTCTCGGGAAAGCCATCAGAAGGAAACATTTCTTCAAGATGTTGAAAGAAATTTTAATATACTGAGTGGGATTGAGAGATTAAAGGATAGTGGATGGATATTCATTGATAATGAACAGTTTCAATATCTATCCGGGATGATGAGTTCTGTGAAACAGATTTATAAGGACCCATATTCTGCAACGGCCCCTGTGCCAAACCAATCATTATTGACGGATGAAGATGCTGCAATTGCAGAGTCGAACATCAGTCAAATTAGGGATCTGTTTCCTGATTACGGTAAAGGTTTTTTAGCTGCGTGTCTTGAGGTTTATGACCAGAATCCAGAAGAGGTTATTCAAAGAATTTTAGAGGGAACCCTTCATCAAGATCTGCAGAGCCTGGACACCTCGCTAGAGACATTACCACCAGCCAAGCCTACCACTGTGAGTGGGAATGATAAAGGAAAAGGTAAATTAATTGATTCTACGTCAGCATTCTCAAATCCAGAAGTTGTAAGGGGGAAGCAACAGACAGAGGGGTCACTGATGTCATCCTCTGCTTCACTAGGAAAATTTATAAGGAAATCTAGAGCTGATTTGCCTGATCTCAGTATTCTGGATAAAAAGGACGAGAAAGATACATCAAAAACTGCTGCTATGATTTTACAATATGAATATGAAGATGAGTATGACGACTCTTTTGATGACTTGGGTTTAAGTGTAGCAGACTCTGGATTAGAAGAAAATGAGATACTTGGTGACCAAATAAATGCAAAATCAGGGAAGTCGTGGGCAACAGAGAGTGGAAACTCGGCAAAAGATGTCCCTGATTCAAAATGGGGCTCCAGGAGAAAGCCACAGTACTATGTCAAGGATGGTAAGAATTACAGCTACAAAGTGGCTGGTGCGGTAGCAGTTGCAAATTCCGGTGAAGCTTCACTAGTAACGCAAGCTCAGAAAGAGTTAATACATGGCCTTGGACGAGGCGGAAACCTTCCTCTTGGAGCAGTAAAGAAGTTGACGGATTCCTACAAGGAGGATGATAACCAATCCCAGGTTTCTGAAATGGAAGGCAATGGGATTCCGGGCAAATCTTTTGGTAGGGGTAGTAGGAAGGAAGGTGGAAGACAGATTGCATCTCATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTGTGCAACAATCTGGTGATTCTGAGGTGGATGGGAATAACCAAAGGGGTAGAGGAAGAGGTAGAGGGAGGGGCAGAGGAGGAGGAAGAAACAATCACCACCAGAAGGATCGATCCATGAAGAAGCATTTCTCTGGAATGAGCGGATTTTAA 2571 0.4325 MSNRSDQGRQDNNNKGFTKTHNHNNFLPKNPNPTLSTSLRQTQPSIPATTSGVPNRGQNGNFVKYLPQDEAVAAGLGAEDGALDPLESQRVVDLLNTHLSRLLKCKPKQFWTQVAADASLHEFLDSFLQFRNRWYDFPHRGVKGIVAGVIVGERDLSRRVFMVLYRISSNKDPGARPADALSLRDHGVLLQEKKLLELPKLLDICAIYYHENEELTRSLVRNAFSAQPWLHNNLTAVISHFLGIVSTMHERCSSSLEVLFSSGNLDDHNAAFLQADLLEVMDFINDAIVSMDSFVSAYEPAAVFFSCPVEMSYGNEELLSLLARLHDSLIPSLQKGFRLIFSDKHDGTTSNILVSLKMLKIRLVKFGWQLLHLCYLSDEVFRDGIPLPAATKMFPANVEDPVIRADILVQTIRDINTVSSHSRESHQKETFLQDVERNFNILSGIERLKDSGWIFIDNEQFQYLSGMMSSVKQIYKDPYSATAPVPNQSLLTDEDAAIAESNISQIRDLFPDYGKGFLAACLEVYDQNPEEVIQRILEGTLHQDLQSLDTSLETLPPAKPTTVSGNDKGKGKLIDSTSAFSNPEVVRGKQQTEGSLMSSSASLGKFIRKSRADLPDLSILDKKDEKDTSKTAAMILQYEYEDEYDDSFDDLGLSVADSGLEENEILGDQINAKSGKSWATESGNSAKDVPDSKWGSRRKPQYYVKDGKNYSYKVAGAVAVANSGEASLVTQAQKELIHGLGRGGNLPLGAVKKLTDSYKEDDNQSQVSEMEGNGIPGKSFGRGSRKEGGRQIASHQQQQQQQQQQQPVQQSGDSEVDGNNQRGRGRGRGRGRGGGRNNHHQKDRSMKKHFSGMSGF 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02195 856 CDD CUE_ASCC2 500 539 IPR041800 -
Vian4g02195 856 MobiDBLite consensus disorder prediction 825 846 - -
Vian4g02195 856 MobiDBLite consensus disorder prediction 552 571 - -
Vian4g02195 856 SUPERFAMILY UBA-like 499 555 IPR009060 GO:0005515
Vian4g02195 856 Pfam CUE domain 500 540 IPR003892 GO:0043130
Vian4g02195 856 Gene3D - 499 541 - -
Vian4g02195 856 ProSiteProfiles CUE domain profile. 498 541 IPR003892 GO:0043130
Vian4g02195 856 SMART cue_7 498 540 IPR003892 GO:0043130
Vian4g02195 856 MobiDBLite consensus disorder prediction 757 856 - -
Vian4g02195 856 MobiDBLite consensus disorder prediction 790 818 - -
Vian4g02195 856 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 11 855 - -
Vian4g02195 856 MobiDBLite consensus disorder prediction 674 699 - -
Vian4g02195 856 MobiDBLite consensus disorder prediction 674 689 - -
Vian4g02195 856 MobiDBLite consensus disorder prediction 1 62 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02195 K18667 - gmx:100778129 1389.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02195 4 38743207 38749098 Vian4g02195 4 38743207 38749098 ECH