Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02183 ATGGTGTTTGGGCAAGTAGTAGTTGGGCCTCCTGGCTCTGGCAAAACAACTTATTGCAATGGCATGTCTCAGTTTCTAAGTCTCATTGGAAGGAAGGTTGCTGTTATCAATTTGGATCCCGCTAATGATTCATTACCCTATGAATGTGCTGTGAACATTGAGGATCTTGTGAAATTAAGTGATGTAATGGTGGAACATTCACTTGGTCCAAATGGGGGTCTTGTGTACTGCATGGATTATCTTGAGAAAAATATCGACTGGTTGGAAGCAAAATTGGAACCTCTTTTGAAAGATCACTACCTACTCTTTGATTTTCCTGGCCAAGTGGAACTCTTTTTCCTTCATTCAAGTGCCAAGAATGTCATCATGAAGCTCATAAATAAATTGAACCTAAGGTTAACTGCAATGCATTTGATTGATGCCCATCTTTGCAGTGACCCTGGGAAATATATTAGTGCATTGCTTTTATCCTTGTCCACGATGCTACATCTAGAACTCCCTCACATAAATGTCTTGTCTAAAATTGATTTAATTGAGAGCTACGGAAAGCTAGCCTTTAACCTTGATTTCTATACAGACGTGCAAGACTTGTCGTATTTACAACACCATCTTGATCAAGATCCTCGCTCTGCTAAGTACAGAAAACTCACAAAGGAACTATGTGAAGTTATTGAGAACTTCAGTCTTGTGAGTTTTACAACCTTAGATATTCAGGACAAAGAGAGTGTAGGGAATTTGGTGAAGCTGATAGACAAATGCAATGGGTACATATTTACCGGTATAGAAGCAAGTGCAGTTGAATTTAGCAAGCTTGCAGTTGGTCCTGTTGATTGGGATTATTATAGATATCCTTTTTTTCGTCATCTATTCTGA 873 0.3883 MVFGQVVVGPPGSGKTTYCNGMSQFLSLIGRKVAVINLDPANDSLPYECAVNIEDLVKLSDVMVEHSLGPNGGLVYCMDYLEKNIDWLEAKLEPLLKDHYLLFDFPGQVELFFLHSSAKNVIMKLINKLNLRLTAMHLIDAHLCSDPGKYISALLLSLSTMLHLELPHINVLSKIDLIESYGKLAFNLDFYTDVQDLSYLQHHLDQDPRSAKYRKLTKELCEVIENFSLVSFTTLDIQDKESVGNLVKLIDKCNGYIFTGIEASAVEFSKLAVGPVDWDYYRYPFFRHLF 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02183 290 FunFam GPN-loop GTPase 2 4 265 - -
Vian4g02183 290 Pfam Conserved hypothetical ATP binding protein 7 255 IPR004130 -
Vian4g02183 290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 256 IPR027417 -
Vian4g02183 290 PANTHER XPA-BINDING PROTEIN 1-RELATED 1 262 IPR004130 -
Vian4g02183 290 Gene3D - 4 265 IPR027417 -
Vian4g02183 290 CDD GPN2 3 252 IPR030231 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02183 Vian-Chr4 38655602 38658266 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02183 K24104 - gmx:100781338 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02183 4 38655602 38658266 Vian4g02183 4 38655602 38658266 ECH