Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02180 ATGACTGAGGGCGGTGACAGTGGTGGTTGCGGTGGCAATGGCGGTAATAAAAAGACACAACCTGAAGTGGCGTTAGCTCTACCACATCCAGTGAAAGAACAATTACCTGATGTTCAGTATTGCATTAAGAAACAAGCAGTGTTATTGGGATTTCAGCATTATATTCTGACTCTTGGTGTGACAGTTCTGATTCCAACAACGATCGTTACTGAAATGGGTGGGGGCCATGCTGAGAAGGCCAAGGTGATACAGAATCTACTGTTTGTTTCTGGAGCAAGCACGCTTCTGCAATCTTGGTTTGGAACACGATTGCCAACCGTAGTTGTTGGTTCATACAGTTTCCTAATACCCACAATGTCAATTGTCCATGCCAAGAGATACAGTTCATATACAGATCCTTACGAGAGGTTCACTCATACAATTAGAGGGATACAAGGCGCCTTGATTGTGAGTGCATGTTTTCATATAGTTGTGGGATTCTTGGGCCTTTGGAGGGGTGCTGTCAGGTTCCTTAGCCCACTTTCTGTTGTCTCTTACGTAACTTTCACTGGACTCGGTCTCTATCATCTTGGATTCCCAATGTATCTTAATAGATTTATTAGCCCCAACAAGCTTATCAACGGCAGATTTGCGGTGTTGTTTTCCATTGCAAGTGCATGGTTAATTGCACAGATTCTGACTGCAAGCACTATATACAACAACAAGCCAGAAGATACCAAGAATAGTTGCCGCACTGATCGTTCTGGTCTTGTGAATTCTTCTAGTTGGGTATATCTCCCTTTTATTCCCTTCCAATGGGGGGTTCCTACCTTCAACTTCGGAGAAGCTTTGGCTATGACAGCAGCTTCTTTTGTTTCTCTTTTTGAGTCTACCGGTGCATTTTATGCCGCGGCAAGGTATGGAAGTGCAACACCCGTGCCACCACATGTTATTGGCCGCGGAGCTGGCTGGGTGGGAGTAGCTTCTTTTTTCAGTGGCGTTTTGGGTTCTGTTACTGGATGTACGGCATCAGTGGAGAATGCTGGATTATTGGCACTGACTAGAGTGGGAAGCCGAAGGGTCATCCAAATATCAGCTGGCTTTATGATTTTCTTCTCCATATTTGGAAAAGTGGGAGCAATTTTTGCTTCTATACCTTTGCCAATCATAGCAGCATTAAACTGTGTGCTCTTGGGCTATGTCTCTTCTGCAGGTCTTGGTTTTCTCCAGTTCTGTAACCTCAACAGTTTCAGAACCAAATTCGTGCTGGGCTCTTCATTCTTCCTCGGCCTCTCCATACCACAATATTTCATAGAAATTTTTCACGTGAAGCATCAACACGGCTGGTTCAATGATATGGTTAGCGTGATCTTTATGTCCCACACAACAGTGGCGGGGTTGATTGCATTCGTTTTGGACACCACACTCACATGCAAAAATGATGCAGCCCATAGGGACAGTGGTTTGCAGTGGTGGGAGAAGTTCAGTGTATATAATGCTGATGGATACCATCCTCCGGCACCACCTTATCATCTTTCTTACAGTATTGTCTCTTCCCTTTCCCGGGCACATCAGTATTCATCTGCATACTTCTCAATGTCTAAATCAATGCGCCTCTGTCAGATGTTTTCCCGAATAGATGAAACGGCGACAATATCCGATTACGTTCAGGTGTTTGAACTTGAATTGCATTTGATAGGGTTCTTCCTTTTTCTCTTTCTCACCATATACACAGCTGCAAAATCTCCAATGGTTGCGGATTTCAATTCCGTTCAACATCTGTCTGAACTGATAGGGAAAGCTGATCTGAACAAGATTCGTTTAGAGCTCTTGAAATGCCTGCCTTCACTGCCCAACATGCATGAGACTCTCAAGCTAAATGACTTGAGTACATCTCTTTATTCTTTAGACTTTTCCTCAGTATCAGGTTGGACCGTTGTGGAACTTCTCAGAAGGTGCTTGCCTGAGCAGTTTTCCCTTGATGGTCTGAAAGGTGACATGAACATGGTATCCCCCTTAGTGGTAGAACCGATTACGAGGTGGCCTTTCTATGCCTTCTTAGGTGGGGCGATGTTCTGTTTGCTGGCCAGCAGCACATGCCACCTCTTTGCTTGCCATTCACAGCGCCTTTCCTACATCATGCTGAGAATTGACTATGCCGGGATTTCTGCATTGATTGCAACTTCATTTTACCCTCCTGTGTATTACACATTCATGTGCAACCCTTTTTCCTGCTACTTCTACTTAGGCTTAATAACACTGATGGGGATAGCCTCCATGATCTTCTCTCTTCTCCCATTTTTCCAAAAATCTGAGTTCAGGAAGTACCGTGCTACTATCTTCTTTTTAATGGGATTTTCAGGTGTGGCACCCATTATACATAAACTCATACTGCACAAGCATCAACCTGAGGCCTTGCAAACAACAGGGTATGAGATACTAATGGGAGTTCTTTATGGTTTGGGAGCAGTAATATATGTGGCAAGGATACCAGAGAGGTGGATGCCAGGGAAGTTTGATATTGCTGGCCACAGTCACCAACTGTTTCATGTCTTGGTTGTGGCAGGGGCATACACACACTATGTTGATGGATTAATCTACCTAAGATGGAGAGATTCTCAAGAGGGTGAAGAAGCAGTGTTTGTTTCTGTCACAGATGCGCATGCCATTGCCATTCACCAATGTCCGTTGAAGTCATCAACTCGTGGACAACATCACTCTAACTACATTTCTTCCATCGTAAAGAAAGTTGGTGCTGCTAGGGAATGGAATCTTGAAACACTTCAATTTCGCAATTTCGCAATCGGCAATCTTTGA 2796 0.4421 MTEGGDSGGCGGNGGNKKTQPEVALALPHPVKEQLPDVQYCIKKQAVLLGFQHYILTLGVTVLIPTTIVTEMGGGHAEKAKVIQNLLFVSGASTLLQSWFGTRLPTVVVGSYSFLIPTMSIVHAKRYSSYTDPYERFTHTIRGIQGALIVSACFHIVVGFLGLWRGAVRFLSPLSVVSYVTFTGLGLYHLGFPMYLNRFISPNKLINGRFAVLFSIASAWLIAQILTASTIYNNKPEDTKNSCRTDRSGLVNSSSWVYLPFIPFQWGVPTFNFGEALAMTAASFVSLFESTGAFYAAARYGSATPVPPHVIGRGAGWVGVASFFSGVLGSVTGCTASVENAGLLALTRVGSRRVIQISAGFMIFFSIFGKVGAIFASIPLPIIAALNCVLLGYVSSAGLGFLQFCNLNSFRTKFVLGSSFFLGLSIPQYFIEIFHVKHQHGWFNDMVSVIFMSHTTVAGLIAFVLDTTLTCKNDAAHRDSGLQWWEKFSVYNADGYHPPAPPYHLSYSIVSSLSRAHQYSSAYFSMSKSMRLCQMFSRIDETATISDYVQVFELELHLIGFFLFLFLTIYTAAKSPMVADFNSVQHLSELIGKADLNKIRLELLKCLPSLPNMHETLKLNDLSTSLYSLDFSSVSGWTVVELLRRCLPEQFSLDGLKGDMNMVSPLVVEPITRWPFYAFLGGAMFCLLASSTCHLFACHSQRLSYIMLRIDYAGISALIATSFYPPVYYTFMCNPFSCYFYLGLITLMGIASMIFSLLPFFQKSEFRKYRATIFFLMGFSGVAPIIHKLILHKHQPEALQTTGYEILMGVLYGLGAVIYVARIPERWMPGKFDIAGHSHQLFHVLVVAGAYTHYVDGLIYLRWRDSQEGEEAVFVSVTDAHAIAIHQCPLKSSTRGQHHSNYISSIVKKVGAAREWNLETLQFRNFAIGNL 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02180 931 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 25 494 - -
Vian4g02180 931 Pfam Haemolysin-III related 556 854 IPR004254 GO:0016020
Vian4g02180 931 Pfam Permease family 203 430 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vian4g02180 931 Pfam Permease family 45 198 IPR006043 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02180 Vian-Chr4 38630436 38639865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02180 28 494 Organic Solute Cotransporters AT1G65550 56.064 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02180 - - gmx:100800316 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02180 4 38630436 38639865 Vian4g02180 4 38630436 38639865 ECH