Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02174 ATGAAGAAACAGGGTGTGGTCAGGATTGGGTTTGCGACACTCACAGAGGTTGTCGTTGTGATGTTGTCAGTGGTATGCACGTGCGGGGCCAGCACAAGCGGGAACCTGCACCCATTGATTCTAGTACCTGGTAACGGAGGGAACCAGCTAGAAGCCAAGTTGAGCAGAGAGTACAAGCCATCCAGTTTCATCTGCGAATCCTGGTACCCTCTTGGGAAGAAAAACAAAGGCTGGTTCAGACTCTGGTTTGATTCCAGTGTCATTCTTGCACCTTTCACTCAATGCTTTGCTCAACGCATGACCCTTCACTACCATCCACAACTCGATGATTACTTCAACACCCCCGGAGTTCTCACTCGGGTCCCTCAATTCGGTTCCATCAATTCCCTTCTTTATCTCAATCCTCGTCTCAAGCATATTACCGAATACATGGCATCCCTGGTGGATTCATTGCAAGAGCTTGGTTATGCTGATGGTGAGACTCTATTTGGTGCCCCCTATGACTTTCGATATGGTTTAGCTGCTGAAGGTCATCCCTCACAAGTGGGTTCCAAGTTCCTAAAAGACCTAACGAAATTGATAGAAGAAGCAAGCGCTTCCAACGGTGGGAAGCCAGTGATACTGGTATCCCACAGTTTAGGAGGTTTATTTGTCCTACAACTCCTAATTCGAAACCCTCCTTCTTGGCGTGAAAAATTCATCAAACACTTCATTGCTCTTTCAGCTCCATGGGGTGGTGCTGTAGACGAAATGTTCACCTTTGCATCTGGCAACACTCTAGGAGTGCCCCTGGTGGACCCTTTGTTAGTGAGGGGTGAACAAAGAAGCTCCGAGAGTAACCTCTGGCTTTTGCCTAACCCCAAAATATTTGGTCCTCAAAAACCAATTGTGATCACTCCAAATAAGACCTATTCCGCACATGACATGGTTGATTTTCTCAAGGACATTGGTTTTCCCGAAGGGGTTTACCCTTACGAAACACGCATTGTACCCTTGATAGGGAACATTCCAGCGCCACACGTGCCTATAACTTGTATTATGGGAACAGGAGTGAGAACCTTGGAAAGCTTGTTTTATGAGAAAGGGGATTTTGATGAGCGGCCAGAAATTTCATATGGGGATGGTGATGGAACGGTGAACTTGGTGAGCTTGCTGGCGCTTCAAGCACTATGGAAAGAGGAGAAAAATCAATACCTTAAAGTGGTTAAGATAGATGGTGTGTCGCATACTTCAATACTCAAAGACGAAGTTGCGCTTAATGAAATTGTTCATGAGATTAGTGCAATTAACTCTCATGCTGACCTTGGTTTGTCCAATGTGTTTTCGGGGTAA 1332 0.4595 MKKQGVVRIGFATLTEVVVVMLSVVCTCGASTSGNLHPLILVPGNGGNQLEAKLSREYKPSSFICESWYPLGKKNKGWFRLWFDSSVILAPFTQCFAQRMTLHYHPQLDDYFNTPGVLTRVPQFGSINSLLYLNPRLKHITEYMASLVDSLQELGYADGETLFGAPYDFRYGLAAEGHPSQVGSKFLKDLTKLIEEASASNGGKPVILVSHSLGGLFVLQLLIRNPPSWREKFIKHFIALSAPWGGAVDEMFTFASGNTLGVPLVDPLLVRGEQRSSESNLWLLPNPKIFGPQKPIVITPNKTYSAHDMVDFLKDIGFPEGVYPYETRIVPLIGNIPAPHVPITCIMGTGVRTLESLFYEKGDFDERPEISYGDGDGTVNLVSLLALQALWKEEKNQYLKVVKIDGVSHTSILKDEVALNEIVHEISAINSHADLGLSNVFSG 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02174 443 Pfam Lecithin:cholesterol acyltransferase 79 313 IPR003386 GO:0006629|GO:0008374
Vian4g02174 443 Gene3D alpha/beta hydrolase 86 279 IPR029058 -
Vian4g02174 443 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 33 428 - -
Vian4g02174 443 SUPERFAMILY alpha/beta-Hydrolases 33 426 IPR029058 -
Vian4g02174 443 Gene3D alpha/beta hydrolase 362 427 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02174 Vian-Chr4 38576469 38577923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02174 17 430 Acyl Lipid Metabolism Gene Families AT1G27480 61.631 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02174 - - gmx:100804027 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02174 4 38576469 38577923 Vian4g02174 4 38576469 38577923 ECH