Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02155 ATGGATGAGAGAGGATATGGATATACGTGGATATGTGTAGTGGGTAATGGGCAATGGATTTTGGATATGTACAGCCACCTCGATCGGCTGTATCTCTTATCTCTCTTCCCTCTTCCTCCTCCAATTTTTCCTCCTCAAGCATTTTGCGTTTCGGATCCTAATTCCCTCACCATTGTAGCCAGCACAATGATTCGAAGCTCCTTTCCCAGTTTCAGGAGATTGCTTCTTCAGAATGTTTCGCCTTCTGCGTCCTCCAAGATCGGAATGTACAATTGGTTTACTTCTCAGCCCTACCCTCTTGAGAGCCCCAACCCTACTTACAGTGATGAGGAGTATGCTGACGTGGATTGGGACAGCCTTGGATTTGGATTGATGGCTACTGATTATATGTACATTACTAAATGTTGTGAGGGCCAACATTTTGAAGAAGGCCAACTCAGTCGATATGGGAACATTAAACTCAGTCCAGCTGCCGGAGTCCTAAATTATGGTCAGGGATTATTTGAAGGCACAAAAGCATACAGAAAAGAAAATGGGCGCGTGCTACTCTTCCGTCCGGAACAAAATGCCATTAGAATGAAGATTGGTGCAGAAAGAATGTGCATGGCATCCCCTTCCATAGAACATTTCGTTCATGCTTTGAAACAAACTGTCTTGGCTAATAAACGTTGGATTCCTCCACCGGGAAAAGGGTCCTTGTATCTTAGGCCTCTGCTCTTAGGAACGGGTCCAGTTTTGGGTTTGGCTCCCGCACCAGAATACACATTCCTCATATACGCTTCCCCTGTTCGCAACTATTTCAAGGAGGGTTCGGCGCCGCTCAACTTGCACGTAGAGGAGAACTTTGACCGTGCTTCTCGCCGCGGCACTGGAAACGTTAAAACCATTTCCAATTATGCACCGGTTTTGATGGCACAAACTACAGCTAAGAAAAGAGGATTTTCAGACGTGTTGTACCTTGATTCAGCCACCAAGAAAAATCTGGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGGAAAATGCATAGCTACTCCTGCTACCAATGGAACTATTCTTTCCGGAATTACCCGAAAAAGTGTCATTGAAATTGCGGGTGATCTTGGCTATCAGGTAGAAGAGCGTGCTGTTGGTGTTGATGAATTGATTGAGGCTGATGAAGTTTTCTGCACAGGAACTGCTGTAGGTGTTGCCCCTGTAGGGAGTATCACATATCAGGATAAAAGGATGGAATATATAACGGGCTCTGGAACCATTTGTCAAGAGTTGAACGATACCATTTCAGGAATTCAAACTGGTACTATTCAAGATAAGAAGGGATGGATCATTGAAGTAGATTAA 1344 0.4449 MDERGYGYTWICVVGNGQWILDMYSHLDRLYLLSLFPLPPPIFPPQAFCVSDPNSLTIVASTMIRSSFPSFRRLLLQNVSPSASSKIGMYNWFTSQPYPLESPNPTYSDEEYADVDWDSLGFGLMATDYMYITKCCEGQHFEEGQLSRYGNIKLSPAAGVLNYGQGLFEGTKAYRKENGRVLLFRPEQNAIRMKIGAERMCMASPSIEHFVHALKQTVLANKRWIPPPGKGSLYLRPLLLGTGPVLGLAPAPEYTFLIYASPVRNYFKEGSAPLNLHVEENFDRASRRGTGNVKTISNYAPVLMAQTTAKKRGFSDVLYLDSATKKNLEEVSSCNIFIAKGKCIATPATNGTILSGITRKSVIEIAGDLGYQVEERAVGVDELIEADEVFCTGTAVGVAPVGSITYQDKRMEYITGSGTICQELNDTISGIQTGTIQDKKGWIIEVD 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02155 447 NCBIfam branched-chain-amino-acid transaminase 142 446 IPR005786 GO:0004084|GO:0009081
Vian4g02155 447 PANTHER AMINO ACID AMINOTRANSFERASE 104 446 IPR005786 GO:0004084|GO:0009081
Vian4g02155 447 CDD BCAT_beta_family 153 434 IPR033939 GO:0004084|GO:0009081
Vian4g02155 447 FunFam Branched-chain-amino-acid aminotransferase 100 273 - -
Vian4g02155 447 Pfam Amino-transferase class IV 166 404 IPR001544 GO:0003824
Vian4g02155 447 ProSitePatterns Aminotransferases class-IV signature. 330 359 IPR018300 GO:0003824
Vian4g02155 447 Gene3D - 275 446 IPR043132 -
Vian4g02155 447 Gene3D - 96 274 IPR043131 -
Vian4g02155 447 FunFam Branched-chain-amino-acid aminotransferase 275 446 - -
Vian4g02155 447 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 106 443 IPR036038 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02155 Vian-Chr4 38382084 38390246 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02155 K00826 - gmx:100782644 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02155 4 38382084 38390246 Vian4g02155 4 38382084 38390246 ECH