Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02130 ATGACGGACCAGTCCTCCAAACCCAACGGAAACGGCGCAATTAACGGCACCGCCGCCACTAACGGCAATTCCGCTCCCGTCAAGTCCCAACTGTACAATCCCAACCGTCAAGTTTACCGACCGCAATCCCATTACCACCGCCGAGGTCAGCGCTCCCACCGCAACCTCTGCTGCTGCTGCTGCTTCTGGACCATCCTCACCGTCCTCGCGGTGGCGCTCCTCGCCGCCATTGTCGGCGCCGCACTGTACGTACTGTACCGCCCTCACCGTCCCGAATTTTCCGTCACCAACCTCCGCATTGTCAAGATGAACCTCACTTCTTCCGCCGACTCTCCCTCGCACCTCGTCACGCTCTTCAACCTCACTCTCATCGCCAAAAACCCCAACAACCACCTTATTTTCTTCTACGACCCCTTCGCCGTTACGGTCTTCTCCAACTCCGTCCCCGTCGGGAACGGGTCCGTTACGGCCTTTACCTCCGACAAAAACAACCAGACGAGCCTCCGCGCGGTGCTGTCCGGTTCGCAAGATCTGGACACTGATTCGTTGACTAACCTGAGATCGGGTCTGAAGATGAAGAAGGGTTTCCCCGTTGAGATACAGATGGATACCAAGGTGAAGATGAAGATGGATTGGCTCAAGAGCAAGAAGGTGGGAATTCGAGTAACGTGCGACGGAATCAGAGGAACGGTTCCCGCCGGCAAGTCTCCGGCAGTGGCTTCCGTGGTGGATTCCGAGTGTAAGGTGGATCTTCGAATCAAGATCTGGAAGTTTTCCTTTTAA 783 0.5607 MTDQSSKPNGNGAINGTAATNGNSAPVKSQLYNPNRQVYRPQSHYHRRGQRSHRNLCCCCCFWTILTVLAVALLAAIVGAALYVLYRPHRPEFSVTNLRIVKMNLTSSADSPSHLVTLFNLTLIAKNPNNHLIFFYDPFAVTVFSNSVPVGNGSVTAFTSDKNNQTSLRAVLSGSQDLDTDSLTNLRSGLKMKKGFPVEIQMDTKVKMKMDWLKSKKVGIRVTCDGIRGTVPAGKSPAVASVVDSECKVDLRIKIWKFSF 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02130 260 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 23 249 - -
Vian4g02130 260 MobiDBLite consensus disorder prediction 1 33 - -
Vian4g02130 260 Gene3D - 84 223 - -
Vian4g02130 260 SUPERFAMILY LEA14-like 73 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02130 Vian-Chr4 38139563 38140345 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02130 34 253 EF-hand Containing Proteins AT5G21130 30.263 3.14e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02130 - - gmx:100786652 476.092