Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02128 ATGCAAGGAATAGAAGGAGGATTTGTGAGTTCAAACGAGGTAGAGCTGAGTCCCACTATGAGTAACTCGTCCTCACTGTCCATGGAGCTAGACGAGTCTACCGAGACCAGGATCCAACGCCTCATATCGGAGCATCCGGTCATCATCTTCACCCGATCCTCCTGCTGCATGTGTCATGTCATGAAGAACCTTTTAGCCACCATCGGTGTTCATCCCACCGTCATCGAATTAGATGATAATGAGATCGCCGCTCTTCCCCTCTCAGACACCATCGCCCCTGCAGCATTCATAGGCGGCACCTGCATCGGTGGCCTTGAATCCCTTGTCGCCCTCCATGTCACCGGCCACCTCATTCCTAAACTCGTCCAAGTCGGCGCTCTCTGGGTATGA 390 0.5308 MQGIEGGFVSSNEVELSPTMSNSSSLSMELDESTETRIQRLISEHPVIIFTRSSCCMCHVMKNLLATIGVHPTVIELDDNEIAALPLSDTIAPAAFIGGTCIGGLESLVALHVTGHLIPKLVQVGALWV 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02128 129 Pfam Glutaredoxin 47 83 IPR002109 -
Vian4g02128 129 Gene3D Glutaredoxin 27 128 - -
Vian4g02128 129 SUPERFAMILY Thioredoxin-like 34 128 IPR036249 -
Vian4g02128 129 PANTHER GLUTAREDOXIN 37 128 IPR011905 -
Vian4g02128 129 NCBIfam glutaredoxin-like family 38 129 IPR011905 -
Vian4g02128 129 MobiDBLite consensus disorder prediction 1 25 - -
Vian4g02128 129 ProSiteProfiles Glutaredoxin domain profile. 35 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02128 Vian-Chr4 38119081 38119470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02128 37 129 Miscellaneous Gene Families AT4G15660 42.574 1.28e-23 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02128 - K03676 gmx:100791969 196.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00578 7 13580007 13581471 Vian4g02128 4 38119081 38119470 PCT