Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02122 ATGTGGGAATCAATTCTTTTGACGGTGGTTGCCACCGCCGGCAACAACATCGGCAAAATCCTTCAGAAGAAGGGCACCGTCATTCTTCCTCCTCTCTCTTTCAAGTTTAAGGTCATAAGGGCATATGCTTTGAATAAAACCTGGCTCATAGGTTTTCTGATGGATATATTTGGGGCACTGTTGATGTTAAGGGCATTAGCTCTGGCTCCTGTCTCTGTCATCCAACCAGTTTCTGGCTGTGGACTGGCAATTCTTTCGGTCTTTTCTCATTTTTATCTCAAGGAAGTCATGAATGTTGTTGATTGGGTGGGCATTACCTTCGCAGGTTTCGGTACAATAGGAGTTGGTGCTGGAGGTGAGGAGCAAGGGGCTGCTGCTCTATCTATATTTCACATACCGTGGCTGGCATTTGTTGTTTTCATCTTGTTTATAATGCTTAATGGATGGCTTCGAATATGTAGGCGTAATCGAAGAGAACACGAGATGGTTGAATATGATGTTGTTGAGGAAATTATTTATGGCTTGGAATCTGGAATTTTGTTTGGGATGGCATCTGTAATATCAAAGATGGGGTTCCTGTTCCTGGAGCAAGGCTTCCCCAAGCTGTTGGTTCCTATATGCATAATCGTAAGTGTCTGTTCAAGTGGTACAGGCTTTTACTACCAGACACGTGGTCTAAAACACGGGCGGGCTATTATAGTTTCTACATGCGCAGCTGTGGCATCAATTTTGACTGGTGTACTAGCTGGGATGCTTGCTTTGGGTGAGCGACTTCCTTCGGCACCAAAAGCTCGCATGTTACTCCTTCTAGGATGGCTACTTATTATTGTTGGGGTGATTTTACTTGTTGGTTCAGAAAAGCTAGTAAAATTCTTTCGATTGTCTTCACACCACTTTAAAAGAAGCAACGTTGATAAAAACTACGGCCATAGAAGATCTGCAACTTCCCGTATTAGGGAACCTAGCCCAACTGCTGTCATTCAAGCAGCGACAGTAAATCATTTACTGTAA 1011 0.4352 MWESILLTVVATAGNNIGKILQKKGTVILPPLSFKFKVIRAYALNKTWLIGFLMDIFGALLMLRALALAPVSVIQPVSGCGLAILSVFSHFYLKEVMNVVDWVGITFAGFGTIGVGAGGEEQGAAALSIFHIPWLAFVVFILFIMLNGWLRICRRNRREHEMVEYDVVEEIIYGLESGILFGMASVISKMGFLFLEQGFPKLLVPICIIVSVCSSGTGFYYQTRGLKHGRAIIVSTCAAVASILTGVLAGMLALGERLPSAPKARMLLLLGWLLIIVGVILLVGSEKLVKFFRLSSHHFKRSNVDKNYGHRRSATSRIREPSPTAVIQAATVNHLL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02122 336 Gene3D - 3 118 - -
Vian4g02122 336 SUPERFAMILY Multidrug resistance efflux transporter EmrE 185 286 - -
Vian4g02122 336 SUPERFAMILY Multidrug resistance efflux transporter EmrE 25 119 - -
Vian4g02122 336 PANTHER UNCHARACTERIZED 2 297 IPR008521 GO:0015095|GO:0015693|GO:0016020
Vian4g02122 336 Pfam Magnesium transporter NIPA 39 284 IPR008521 GO:0015095|GO:0015693|GO:0016020
Vian4g02122 336 FunFam Probable magnesium transporter 5 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02122 Vian-Chr4 38057882 38061223 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02122 - - gmx:100803982 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00572 7 13511608 13516442 Vian4g02122 4 38057882 38061223 PCT