Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02105 ATGTGGCTGGATGCAAAAGCAGCGCGAGATGCAAAAGTATTGGCCACTCCTGCTGATGTTAAGGAATATGGGAACTCTTATGTGTTCGTGATCGACATGCCTGGCCTGAAATCTGAAGACATTAAGGTGATGGAAGAGGACAACGCGTTAATCGTTAGCAGCGAGAGGAAGAGGGAGGAGGAGAAAGAAGGAGTTAAGTATTTGAGGATGGAGAGAAAAATGGGAAAGTTCATGCGCAAGTTTATACTTCCAGACAATGTCAACACTGATGCCATATCTGCTGTCTGCCAGGATGGTGTGCTCATCGTCACCGTCAACAAGTTGCTTCCTCCTGAACCCAAGAAGCCCAAGATTATTGAGGTCAAGATTGGTTAA 375 0.4587 MWLDAKAARDAKVLATPADVKEYGNSYVFVIDMPGLKSEDIKVMEEDNALIVSSERKREEEKEGVKYLRMERKMGKFMRKFILPDNVNTDAISAVCQDGVLIVTVNKLLPPEPKKPKIIEVKIG 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02105 124 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 9 122 IPR002068 -
Vian4g02105 124 SUPERFAMILY HSP20-like chaperones 12 118 IPR008978 -
Vian4g02105 124 Gene3D - 2 123 IPR008978 -
Vian4g02105 124 CDD ACD_sHsps-like 19 107 - -
Vian4g02105 124 FunFam 17.3 kDa class II heat shock protein-like 4 123 - -
Vian4g02105 124 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 7 121 IPR031107 -
Vian4g02105 124 Pfam Hsp20/alpha crystallin family 20 122 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02105 Vian-Chr4 37880854 37881228 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02105 K13993 - qsu:112019894 152.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02105 4 37880854 37881228 Vian4g02105 4 37880854 37881228 ECH