Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02099 ATGAAAGCATTCGCATTATCACCATCACTGCTTAACTTCAAATCTTTCACGTTCCACCACTCTTCCTCTTCTAACCCCCTTTTCCCCCTCTCTTTCATTCTCCCCTCTCTCTCCCCCTGCCATCTCCGCCACCACCGCCCAATCCACCGTCACTCTCCAATCATGGCCGCCGCTTCATTCAACTCCGAACGCGCCCGGGCCCCACCCGCCATTCCCATGCCCTCTCCCCCTCTGTCCAAGTTCAAAATTGGTCTCTGTCAACTCTCCGTCACTCCCGACAAAGATAGGAACATCGCCCACGCGCGCACCGCCATTCAGGACGCTGCATCCAAGGGCGCTCAGCTTGTTCTTTTGCCTGAAATTTGGAACAGTCCTTATTCCAATGACAGTTTCCCTGTCTACGCTGAGGATATTGACGCCGGTGCCGATGCTTCTCCTTCCACCGCCATGCTCTCTGAACTCTCTCGTCTCTTGAAAATCACCATCGTCGGTGGTTCCATTCCAGAACTTTCTGGGGGTCGCTTGTATAACACTTGTTGCGTTTTCGGGACTGATGGAAAGCTGCTCGCCAAGCACCGCAAGATACATCTTTTTGATATTGACATCCCTGGGAAGATTACATTTATCGAGTCAAAAACTCTTACTGCTGGGGAGACTCCGACGATTGTTGACACAGAGGTTGGACGCATTGGCATAGGCATTTGTTATGACATTCGGTTTCCAGAACTAGCAATGATATATGCTGCTAGAGGTGCTCATTTACTCTGCTATCCTGGGGCATTTAACATGACAACCGGACCATTACATTGGGAGTTATTGCAGAGGGCAAGGGCTACAGATAATCAGTTGTATGTGGCTACCTGTTCGCCTGCTCGGGATACAGGATCTGGTTATGTGGCCTGGGGCCACTCTACTCTTGTAGGGCCATTTGGAGAAGTTCTGGCTACTACAGAACACGACGAGGCTATCATCATTGCAGAAATTGATTATTCAATATTGGAGCAGAGAAGGACAAATCTCCCTGTAACTAAGCAAAGACGAGGTGATCTTTACCAGTTGGTCGATTTTCAGAGGCTGAATTCCCAGTGA 1089 0.4968 MKAFALSPSLLNFKSFTFHHSSSSNPLFPLSFILPSLSPCHLRHHRPIHRHSPIMAAASFNSERARAPPAIPMPSPPLSKFKIGLCQLSVTPDKDRNIAHARTAIQDAASKGAQLVLLPEIWNSPYSNDSFPVYAEDIDAGADASPSTAMLSELSRLLKITIVGGSIPELSGGRLYNTCCVFGTDGKLLAKHRKIHLFDIDIPGKITFIESKTLTAGETPTIVDTEVGRIGIGICYDIRFPELAMIYAARGAHLLCYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDTGSGYVAWGHSTLVGPFGEVLATTEHDEAIIIAEIDYSILEQRRTNLPVTKQRRGDLYQLVDFQRLNSQ 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02099 362 ProSitePatterns Uncharacterized protein family UPF0012 signature. 231 251 IPR001110 -
Vian4g02099 362 CDD nit 82 347 IPR045254 GO:0016811
Vian4g02099 362 Pfam Carbon-nitrogen hydrolase 83 333 IPR003010 GO:0006807
Vian4g02099 362 PANTHER NITRILASE-RELATED 60 354 - -
Vian4g02099 362 FunFam Omega-amidase chloroplastic 78 356 - -
Vian4g02099 362 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 81 330 IPR003010 GO:0006807
Vian4g02099 362 Gene3D - 78 356 IPR036526 -
Vian4g02099 362 SUPERFAMILY Carbon-nitrogen hydrolase 74 347 IPR036526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02099 Vian-Chr4 37830059 37835234 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02099 K13566 - gmx:100817195 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02099 4 37830059 37835234 Vian4g02099 4 37830059 37835234 ECH